Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMAD6O43541 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
SMAD6O43541 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMAD6O43541 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMAD6O43541 RNU6-858P-201ENST00000362436 107 ntBASIC2.54□□□□□ -2
SMAD6O43541 Y_RNA.76-201ENST00000362931 109 ntBASIC2.54□□□□□ -2
SMAD6O43541 Y_RNA.83-201ENST00000363005 113 ntBASIC2.54□□□□□ -2
SMAD6O43541 SNORA36A-201ENST00000384221 132 ntBASIC2.54□□□□□ -2
SMAD6O43541 RNU6-886P-201ENST00000384319 105 ntBASIC2.54□□□□□ -2
SMAD6O43541 RNU6-541P-201ENST00000384709 110 ntBASIC2.54□□□□□ -2
SMAD6O43541 MIR10B-201ENST00000385011 110 ntBASIC2.54□□□□□ -2
SMAD6O43541 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMAD6O43541 MIR888-201ENST00000401186 77 ntBASIC2.54□□□□□ -2
SMAD6O43541 RNU4-30P-201ENST00000410245 143 ntBASIC2.54□□□□□ -2
SMAD6O43541 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.54□□□□□ -2
SMAD6O43541 WARS2P1-201ENST00000429678 537 ntBASIC2.54□□□□□ -2
SMAD6O43541 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.54□□□□□ -2
SMAD6O43541 AC096638.1-201ENST00000444678 216 ntBASIC2.54□□□□□ -2
SMAD6O43541 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.54□□□□□ -2
SMAD6O43541 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.54□□□□□ -2
SMAD6O43541 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
SMAD6O43541 UBL5P4-201ENST00000562584 236 ntBASIC2.54□□□□□ -2
SMAD6O43541 MIR5695-201ENST00000579717 85 ntBASIC2.54□□□□□ -2
SMAD6O43541 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
SMAD6O43541 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.54□□□□□ -2
SMAD6O43541 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
SMAD6O43541 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
SMAD6O43541 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
SMAD6O43541 AC005296.1-201ENST00000616145 209 ntBASIC2.54□□□□□ -2
SMAD6O43541 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
SMAD6O43541 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
SMAD6O43541 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
SMAD6O43541 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMAD6O43541 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.54□□□□□ -2
SMAD6O43541 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMAD6O43541 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMAD6O43541 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
SMAD6O43541 Y_RNA.319-201ENST00000365138 92 ntBASIC2.53□□□□□ -2
SMAD6O43541 RNU6-142P-201ENST00000384019 107 ntBASIC2.53□□□□□ -2
SMAD6O43541 MIR544A-201ENST00000384855 91 ntBASIC2.53□□□□□ -2
SMAD6O43541 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMAD6O43541 PCNPP3-201ENST00000393579 471 ntBASIC2.53□□□□□ -2
SMAD6O43541 AL033519.2-201ENST00000403958 392 ntBASIC2.53□□□□□ -2
SMAD6O43541 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.53□□□□□ -2
SMAD6O43541 Y_RNA.793-201ENST00000411222 111 ntBASIC2.53□□□□□ -2
SMAD6O43541 AC104332.1-201ENST00000440471 797 ntBASIC2.53□□□□□ -2
SMAD6O43541 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
SMAD6O43541 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.53□□□□□ -2
SMAD6O43541 Y_RNA.644-201ENST00000459006 113 ntBASIC2.53□□□□□ -2
SMAD6O43541 RPL26P26-201ENST00000480251 434 ntBASIC2.53□□□□□ -2
SMAD6O43541 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.53□□□□□ -2
SMAD6O43541 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
SMAD6O43541 RNU6-581P-201ENST00000516214 105 ntBASIC2.53□□□□□ -2
SMAD6O43541 Y_RNA.674-201ENST00000516362 113 ntBASIC2.53□□□□□ -2
SMAD6O43541 RNU6-406P-201ENST00000516470 107 ntBASIC2.53□□□□□ -2
SMAD6O43541 SNORA31.23-201ENST00000517219 133 ntBASIC2.53□□□□□ -2
SMAD6O43541 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
SMAD6O43541 HSPE1P4-201ENST00000550617 308 ntBASIC2.53□□□□□ -2
SMAD6O43541 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.53□□□□□ -2
SMAD6O43541 AC127459.3-201ENST00000624328 466 ntBASIC2.53□□□□□ -2
SMAD6O43541 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
SMAD6O43541 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.53□□□□□ -2.01
SMAD6O43541 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMAD6O43541 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMAD6O43541 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 Y_RNA.44-201ENST00000362676 108 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNU6-774P-201ENST00000363238 107 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 Y_RNA.199-201ENST00000364014 102 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNU6-281P-201ENST00000384212 103 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNU6-159P-201ENST00000391080 106 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNU6-1001P-201ENST00000411265 100 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 NDUFS5P4-201ENST00000412983 318 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.52□□□□□ -2.01
SMAD6O43541 GPM6BP3-201ENST00000442797 145 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 snoU13.6-201ENST00000458785 104 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RN7SKP49-201ENST00000516675 260 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 RNU6-58P-201ENST00000517143 103 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 SCARNA11.3-201ENST00000517276 130 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 CBX3P4-201ENST00000538909 354 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 AC016256.1-201ENST00000547971 354 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 AL391261.3-201ENST00000557194 520 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 MIR5571-201ENST00000577998 113 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 MIR4423-201ENST00000580922 80 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
SMAD6O43541 AL356157.2-201ENST00000605122 111 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 SNORD113-5-201ENST00000607261 78 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.52□□□□□ -2.01
SMAD6O43541 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.52□□□□□ -2.01
SMAD6O43541 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 HAUS6P2-201ENST00000433254 2404 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.52□□□□□ -2.01
SMAD6O43541 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SMAD6O43541 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMAD6O43541 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.51□□□□□ -2.01
SMAD6O43541 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMAD6O43541 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SMAD6O43541 MIR411-201ENST00000362239 96 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms