Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC009237.7-201ENST00000447357 229 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 AC074290.1-201ENST00000448883 135 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MTCO3P8-201ENST00000453691 755 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MTCO2P18-201ENST00000457151 658 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 AC087854.1-201ENST00000519706 414 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MIR4524B-201ENST00000581569 115 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 Z99497.2-201ENST00000603634 310 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 Y_RNA.123-201ENST00000363338 102 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 RNU6-1305P-201ENST00000364353 104 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 RNU6-1317P-201ENST00000364582 104 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 RNU6-1286P-201ENST00000383871 107 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 RNU6-482P-201ENST00000391068 107 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 RNU6-189P-201ENST00000516120 101 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AC104576.1-201ENST00000524225 88 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AC025423.5-201ENST00000550230 219 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 MIR4528-201ENST00000577763 90 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 MIR4760-201ENST00000585040 80 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AC087683.1-201ENST00000591187 441 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
LRRC40Q9H9A6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 RNU6-968P-201ENST00000384076 107 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 RNA5SP323-201ENST00000391094 133 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 BTF3P4-201ENST00000418852 495 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 AC073464.1-201ENST00000429823 534 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 TPTE2P5-203ENST00000458118 728 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 MTCO3P38-201ENST00000468910 766 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 MRPS36P4-201ENST00000534436 298 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 MIR4424-201ENST00000585257 86 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 MIR6715A-201ENST00000615929 79 ntBASIC1.17□□□□□ -2.22
LRRC40Q9H9A6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 MIR378A-201ENST00000362177 66 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 RNU6-348P-201ENST00000384386 107 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 RNU6-1158P-201ENST00000391167 107 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 RNA5SP467-201ENST00000391274 118 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AC004866.1-201ENST00000411748 78 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 PGBD4P5-201ENST00000445958 426 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 FGF7P1-201ENST00000582820 288 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 MIR4298-201ENST00000584380 73 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AP000942.3-201ENST00000603702 160 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AL391646.1-201ENST00000603860 190 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 SNRPGP20-201ENST00000604477 205 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 RMST_3.1-201ENST00000611651 109 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AC009509.4-201ENST00000619202 509 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 AC068792.1-201ENST00000621354 417 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 MTND4P5-201ENST00000435821 1374 ntBASIC1.16□□□□□ -2.22
LRRC40Q9H9A6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1329P-201ENST00000365664 107 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.381-201ENST00000365666 102 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNA5SP109-201ENST00000391010 116 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RPL21P1-201ENST00000399532 476 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNU6-57P-201ENST00000411348 103 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RPS6P15-201ENST00000431996 751 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 USP9YP29-201ENST00000445112 563 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNU7-57P-201ENST00000459540 60 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1038P-201ENST00000516516 104 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1069P-201ENST00000516612 133 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 AC024995.1-201ENST00000523014 93 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 CENPUP1-201ENST00000526649 1202 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 LRRC34P1-201ENST00000542742 915 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 MIR4742-201ENST00000581069 85 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 AL357078.3-201ENST00000607528 618 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 AC103705.1-201ENST00000619013 241 ntBASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 FER-210ENST00000628534 558 ntTSL 5 BASIC1.15□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 RNU6-82P-201ENST00000363970 107 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 RNU6-1103P-201ENST00000384150 107 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 MIR586-201ENST00000385035 97 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 SNORD37.1-201ENST00000390968 65 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC007215.1-201ENST00000464893 276 ntBASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.14□□□□□ -2.23
LRRC40Q9H9A6 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms