Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU1-76P-201ENST00000362903 159 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.100-201ENST00000363141 102 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNY1P10-201ENST00000363268 113 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.123-201ENST00000363338 102 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORD114-6-201ENST00000364393 72 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU4-12P-201ENST00000365233 139 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-1286P-201ENST00000383871 107 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.414-201ENST00000384011 101 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-95P-201ENST00000384697 107 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR597-201ENST00000384968 97 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR208B-201ENST00000401172 77 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-373P-201ENST00000411247 98 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RPS26P42-201ENST00000413485 326 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MTND1P11-201ENST00000456661 876 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 snoU13.6-201ENST00000458785 104 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 TOMM22P6-201ENST00000465035 409 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MTCYBP18-201ENST00000501056 747 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 TRMT112P2-201ENST00000512910 132 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-1098P-201ENST00000516772 96 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 DEFB131C-201ENST00000528817 165 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MRPS36P4-201ENST00000534436 298 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR3169-201ENST00000578032 83 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 FGF7P1-201ENST00000582820 288 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR3672-201ENST00000584290 82 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 AL359821.1-201ENST00000605519 182 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-784P-201ENST00000384330 106 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORA8-201ENST00000384574 139 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-160P-201ENST00000384591 107 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORA12.2-201ENST00000391040 156 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU11-3P-201ENST00000391111 133 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR548F1-201ENST00000408667 84 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AC244636.1-201ENST00000421152 228 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AL590632.1-201ENST00000424289 371 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 MTND1P34-201ENST00000438556 671 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AC027575.1-201ENST00000481064 460 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AF186996.7-201ENST00000492781 209 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-256P-201ENST00000516747 97 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR4303-201ENST00000581299 66 ntBASIC1.39□□□□□ -2.19
CDC42EP4Q9H3Q1 RNA5SP493-201ENST00000364115 91 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.295-201ENST00000364918 102 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORA32.2-201ENST00000384049 122 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR521-1-201ENST00000384902 87 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORD115-47-201ENST00000391226 86 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AC123900.1-201ENST00000420390 96 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 Z82205.1-201ENST00000428456 297 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AL035666.1-201ENST00000446195 348 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AC011352.1-201ENST00000512300 793 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AP005660.1-201ENST00000522972 293 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AC090517.1-201ENST00000569307 266 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AC146944.4-201ENST00000602697 718 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 RPL17P51-201ENST00000605218 238 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 MIR3976-201ENST00000606807 139 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AL022345.1-201ENST00000607292 135 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AL590240.4-201ENST00000616908 390 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 AC139792.2-201ENST00000624218 587 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 LINC02555-201ENST00000563933 1951 ntBASIC1.38□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.6-201ENST00000362350 114 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORD50.1-201ENST00000362987 71 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.151-201ENST00000363566 112 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.157-201ENST00000363638 102 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 SNORD31B-201ENST00000364977 69 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 RNU6-968P-201ENST00000384076 107 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 RNA5SP118-201ENST00000410385 109 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 RNA5SP501-201ENST00000410990 112 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.37□□□□□ -2.19
CDC42EP4Q9H3Q1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms