Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 Y_RNA.358-201ENST00000365491 99 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 RNU6-142P-201ENST00000384019 107 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 RNU6-713P-201ENST00000384761 107 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.43□□□□□ -2.02
PKP4Q99569 Z82188.1-201ENST00000436709 154 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.43□□□□□ -2.02
PKP4Q99569 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.43□□□□□ -2.02
PKP4Q99569 DYNLT3P2-201ENST00000442517 295 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 RNU7-87P-201ENST00000459343 62 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 RPL23AP75-201ENST00000491601 451 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AC104564.1-201ENST00000493028 407 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 ANXA2P1-201ENST00000505539 926 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AC091874.1-201ENST00000511402 339 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.43□□□□□ -2.02
PKP4Q99569 SNORA25.11-201ENST00000515935 105 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 MIR2355-201ENST00000517199 87 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.43□□□□□ -2.02
PKP4Q99569 AC016256.1-201ENST00000547971 354 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.43□□□□□ -2.02
PKP4Q99569 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.43□□□□□ -2.02
PKP4Q99569 AC009127.3-201ENST00000570531 403 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 RPS15AP11-201ENST00000594193 385 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AL356575.1-201ENST00000603008 283 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 RAC1P9-201ENST00000604990 392 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 AC096772.1-201ENST00000609146 564 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 MIR6817-201ENST00000615588 66 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PKP4Q99569 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
PKP4Q99569 AC080100.1-201ENST00000624239 5356 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNU1-76P-201ENST00000362903 159 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 SNORD115-32-201ENST00000364079 82 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 Y_RNA.214-201ENST00000364201 112 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNU6-1141P-201ENST00000364520 107 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNA5SP240-201ENST00000365355 128 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNU6-487P-201ENST00000365430 104 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 Y_RNA.471-201ENST00000384312 102 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 Y_RNA.512-201ENST00000384518 102 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 MIR544A-201ENST00000384855 91 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNA5SP390-201ENST00000410191 113 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNU2-63P-201ENST00000410792 194 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AL590556.1-201ENST00000423231 483 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP4Q99569 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP4Q99569 RPS3P1-201ENST00000456781 192 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 TOMM22P6-201ENST00000465035 409 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AC107032.1-201ENST00000485945 480 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AC132942.1-201ENST00000486753 483 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RPL30P1-201ENST00000488676 339 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.42□□□□□ -2.02
PKP4Q99569 RNU6-1143P-201ENST00000516125 104 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RNA5SP148-201ENST00000516527 94 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 SNORA40.15-201ENST00000516884 107 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.42□□□□□ -2.02
PKP4Q99569 AC034114.1-201ENST00000520293 285 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.42□□□□□ -2.02
PKP4Q99569 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.42□□□□□ -2.02
PKP4Q99569 AC010928.2-201ENST00000588017 287 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 RMST_6.1-201ENST00000611980 203 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 MIR8062-201ENST00000621515 85 ntBASIC2.42□□□□□ -2.02
PKP4Q99569 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PKP4Q99569 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PKP4Q99569 OR56A5-201ENST00000340110 738 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 Y_RNA.188-201ENST00000363952 111 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 RNU6-17P-201ENST00000384245 107 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 RNU6-18P-201ENST00000384527 107 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 RNU6-1222P-201ENST00000384615 107 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 ELOCP20-201ENST00000422460 345 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 AP001025.1-201ENST00000486139 332 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.41□□□□□ -2.02
PKP4Q99569 AC016632.1-201ENST00000503994 196 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 Y_RNA.668-201ENST00000516233 93 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 HSPE1P4-201ENST00000550617 308 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 AL442163.3-201ENST00000554110 156 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP4Q99569 AC090517.1-201ENST00000569307 266 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 AC090617.3-201ENST00000573670 475 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.41□□□□□ -2.02
PKP4Q99569 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 MIR5739-201ENST00000619803 80 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 SNORA43.4-201ENST00000629559 138 ntBASIC2.41□□□□□ -2.02
PKP4Q99569 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.41□□□□□ -2.02
PKP4Q99569 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PKP4Q99569 RNU6-770P-201ENST00000363929 105 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 SNORA29-201ENST00000384183 140 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RNU6-708P-201ENST00000384217 107 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RNU6-611P-201ENST00000384276 104 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 Y_RNA.504-201ENST00000384481 104 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 MIR518C-201ENST00000384822 101 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 MIR32-201ENST00000384965 70 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RN7SKP61-201ENST00000410642 295 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 301 ms