Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 HMGB3P3-201ENST00000510526 400 ntBASIC3.4□□□□□ -1.87
CTSKP43235 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.4□□□□□ -1.87
CTSKP43235 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.4□□□□□ -1.87
CTSKP43235 AL078604.3-201ENST00000615580 211 ntBASIC3.4□□□□□ -1.87
CTSKP43235 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
CTSKP43235 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CTSKP43235 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTSKP43235 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTSKP43235 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.39□□□□□ -1.87
CTSKP43235 Z83843.1-201ENST00000604070 3685 ntBASIC3.39□□□□□ -1.87
CTSKP43235 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSKP43235 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSKP43235 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSKP43235 Y_RNA.7-201ENST00000362352 102 ntBASIC3.39□□□□□ -1.87
CTSKP43235 RNU6-454P-201ENST00000364292 107 ntBASIC3.39□□□□□ -1.87
CTSKP43235 SNORD113-1-201ENST00000365321 69 ntBASIC3.39□□□□□ -1.87
CTSKP43235 Y_RNA.571-201ENST00000384753 98 ntBASIC3.39□□□□□ -1.87
CTSKP43235 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CTSKP43235 RNU6-710P-201ENST00000410424 105 ntBASIC3.39□□□□□ -1.87
CTSKP43235 AC004866.1-201ENST00000411748 78 ntBASIC3.39□□□□□ -1.87
CTSKP43235 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.39□□□□□ -1.87
CTSKP43235 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.39□□□□□ -1.87
CTSKP43235 Z75741.1-201ENST00000446793 314 ntBASIC3.39□□□□□ -1.87
CTSKP43235 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
CTSKP43235 RN7SL504P-201ENST00000494496 287 ntBASIC3.39□□□□□ -1.87
CTSKP43235 FCF1P8-201ENST00000510322 597 ntBASIC3.39□□□□□ -1.87
CTSKP43235 RNU2-44P-201ENST00000516795 194 ntBASIC3.39□□□□□ -1.87
CTSKP43235 MIR4325-201ENST00000583049 90 ntBASIC3.39□□□□□ -1.87
CTSKP43235 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
CTSKP43235 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.39□□□□□ -1.87
CTSKP43235 AC104465.1-201ENST00000611365 139 ntBASIC3.39□□□□□ -1.87
CTSKP43235 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
CTSKP43235 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTSKP43235 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CTSKP43235 OTUD4P1-201ENST00000237841 3067 ntBASIC3.39□□□□□ -1.87
CTSKP43235 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSKP43235 Y_RNA.8-201ENST00000362353 102 ntBASIC3.38□□□□□ -1.87
CTSKP43235 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
CTSKP43235 RNU6-704P-201ENST00000364162 103 ntBASIC3.38□□□□□ -1.87
CTSKP43235 RNU4-17P-201ENST00000365598 141 ntBASIC3.38□□□□□ -1.87
CTSKP43235 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CTSKP43235 RNU6-1135P-201ENST00000411083 103 ntBASIC3.38□□□□□ -1.87
CTSKP43235 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSKP43235 AL606753.1-201ENST00000427435 87 ntBASIC3.38□□□□□ -1.87
CTSKP43235 RNU7-170P-201ENST00000459303 61 ntBASIC3.38□□□□□ -1.87
CTSKP43235 AL049873.1-201ENST00000480540 376 ntBASIC3.38□□□□□ -1.87
CTSKP43235 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.38□□□□□ -1.87
CTSKP43235 RNU1-117P-201ENST00000517041 158 ntBASIC3.38□□□□□ -1.87
CTSKP43235 DEFB131C-201ENST00000528817 165 ntBASIC3.38□□□□□ -1.87
CTSKP43235 MIR5004-201ENST00000579078 107 ntBASIC3.38□□□□□ -1.87
CTSKP43235 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
CTSKP43235 AP001485.1-201ENST00000604799 199 ntBASIC3.38□□□□□ -1.87
CTSKP43235 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSKP43235 AC004832.4-201ENST00000608952 331 ntBASIC3.38□□□□□ -1.87
CTSKP43235 SCARNA15.3-201ENST00000626315 122 ntBASIC3.38□□□□□ -1.87
CTSKP43235 SCARNA4.1-201ENST00000628597 123 ntBASIC3.38□□□□□ -1.87
CTSKP43235 MTND1P7-201ENST00000632801 297 ntBASIC3.38□□□□□ -1.87
CTSKP43235 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTSKP43235 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CTSKP43235 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTSKP43235 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CTSKP43235 AC058791.1-201ENST00000608412 3198 ntBASIC3.37□□□□□ -1.87
CTSKP43235 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTSKP43235 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.37□□□□□ -1.87
CTSKP43235 Y_RNA.121-201ENST00000363309 113 ntBASIC3.37□□□□□ -1.87
CTSKP43235 U3.8-201ENST00000363675 217 ntBASIC3.37□□□□□ -1.87
CTSKP43235 SNORD87-201ENST00000364849 89 ntBASIC3.37□□□□□ -1.87
CTSKP43235 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
CTSKP43235 MIR767-201ENST00000390228 109 ntBASIC3.37□□□□□ -1.87
CTSKP43235 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.37□□□□□ -1.87
CTSKP43235 HMGN2P20-201ENST00000437531 273 ntBASIC3.37□□□□□ -1.87
CTSKP43235 AC006028.1-201ENST00000438379 402 ntBASIC3.37□□□□□ -1.87
CTSKP43235 AP001486.1-201ENST00000463339 476 ntBASIC3.37□□□□□ -1.87
CTSKP43235 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
CTSKP43235 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSKP43235 HSPE1P18-201ENST00000517602 280 ntBASIC3.37□□□□□ -1.87
CTSKP43235 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSKP43235 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSKP43235 AL670379.2-201ENST00000604983 252 ntBASIC3.37□□□□□ -1.87
CTSKP43235 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTSKP43235 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.37□□□□□ -1.87
CTSKP43235 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTSKP43235 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSKP43235 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSKP43235 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CTSKP43235 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSKP43235 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.36□□□□□ -1.87
CTSKP43235 snoU2_19.1-201ENST00000362361 80 ntBASIC3.36□□□□□ -1.87
CTSKP43235 SNORD115-30-201ENST00000364117 82 ntBASIC3.36□□□□□ -1.87
CTSKP43235 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
CTSKP43235 Y_RNA.238-201ENST00000364441 102 ntBASIC3.36□□□□□ -1.87
CTSKP43235 RNU6-312P-201ENST00000364629 107 ntBASIC3.36□□□□□ -1.87
CTSKP43235 Y_RNA.398-201ENST00000383952 99 ntBASIC3.36□□□□□ -1.87
CTSKP43235 AL031003.1-201ENST00000404229 172 ntBASIC3.36□□□□□ -1.87
CTSKP43235 RNA5SP504-201ENST00000410676 117 ntBASIC3.36□□□□□ -1.87
CTSKP43235 Y_RNA.637-201ENST00000459424 114 ntBASIC3.36□□□□□ -1.87
CTSKP43235 SRIP1-201ENST00000489235 288 ntBASIC3.36□□□□□ -1.87
CTSKP43235 MTND5P41-201ENST00000517498 206 ntBASIC3.36□□□□□ -1.87
CTSKP43235 AC136628.3-201ENST00000521868 290 ntBASIC3.36□□□□□ -1.87
CTSKP43235 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 319.8 ms