Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 Y_RNA.229-201ENST00000364347 113 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 Y_RNA.287-201ENST00000364853 94 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 Y_RNA.393-201ENST00000383936 102 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 Y_RNA.521-201ENST00000384560 114 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 AL606845.1-201ENST00000404881 255 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 AC099548.1-201ENST00000421443 426 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 BPY2DP-201ENST00000422208 265 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 RPL23AP82-202ENST00000427528 469 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 AC004386.2-201ENST00000441858 148 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 SNORA31.16-201ENST00000516773 139 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.81□□□□□ -1.8
GRIK1P39086 LINC00933-203ENST00000559812 219 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 AL031274.2-201ENST00000599419 203 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 AL359198.2-201ENST00000611836 194 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
GRIK1P39086 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
GRIK1P39086 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
GRIK1P39086 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
GRIK1P39086 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GRIK1P39086 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIK1P39086 Y_RNA.415-201ENST00000384012 112 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GRIK1P39086 RNA5SP475-201ENST00000410568 110 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.8□□□□□ -1.8
GRIK1P39086 U3.44-201ENST00000458938 192 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 Y_RNA.651-201ENST00000459380 103 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 RPL23AP70-201ENST00000483361 460 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.8□□□□□ -1.8
GRIK1P39086 RNA5SP54-201ENST00000516951 92 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 AC019159.1-201ENST00000605094 187 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 uc_338.28-201ENST00000612082 187 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 Z82209.1-201ENST00000422141 2135 ntBASIC3.8□□□□□ -1.8
GRIK1P39086 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GRIK1P39086 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GRIK1P39086 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.8□□□□□ -1.8
GRIK1P39086 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
GRIK1P39086 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 RNU6-1310P-201ENST00000384153 107 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 SNORD116-21-201ENST00000384507 92 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 MIR183-201ENST00000384958 110 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 RN7SL293P-201ENST00000481765 281 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 AC016632.1-201ENST00000503994 196 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 MIR3121-201ENST00000579680 77 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 AC007179.3-201ENST00000604976 235 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 MIR7851-201ENST00000610611 160 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 AL391903.3-201ENST00000612158 163 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 U6.95-201ENST00000636931 70 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 AC068647.2-201ENST00000637380 353 ntBASIC3.79□□□□□ -1.8
GRIK1P39086 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GRIK1P39086 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GRIK1P39086 TNPO1P3-201ENST00000436471 2662 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GRIK1P39086 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GRIK1P39086 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GRIK1P39086 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GRIK1P39086 SNORD115-30-201ENST00000364117 82 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 Y_RNA.280-201ENST00000364765 112 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RNU6-32P-201ENST00000383948 107 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RNU6-13P-201ENST00000384248 107 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RNU6-12P-201ENST00000384604 107 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RNU6-41P-201ENST00000384741 107 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GRIK1P39086 AL031003.1-201ENST00000404229 172 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 AL355497.1-201ENST00000406262 551 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 CYCSP4-201ENST00000429682 331 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RPS27P1-201ENST00000450552 247 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 CYCSP35-201ENST00000451978 304 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RPL26P9-201ENST00000457466 433 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 Y_RNA.677-201ENST00000516401 85 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 RNU6-537P-201ENST00000517277 103 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.78□□□□□ -1.8
GRIK1P39086 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
GRIK1P39086 AC006380.1-201ENST00000603598 186 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 AL670379.3-201ENST00000605040 251 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GRIK1P39086 U6.105-201ENST00000637379 88 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 MIR3529-201ENST00000637713 78 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
GRIK1P39086 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
GRIK1P39086 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
GRIK1P39086 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GRIK1P39086 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.77□□□□□ -1.81
GRIK1P39086 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GRIK1P39086 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.77□□□□□ -1.81
GRIK1P39086 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GRIK1P39086 U8.1-201ENST00000362843 134 ntBASIC3.77□□□□□ -1.81
GRIK1P39086 RNU6-525P-201ENST00000363685 104 ntBASIC3.77□□□□□ -1.81
GRIK1P39086 RNU6-1141P-201ENST00000364520 107 ntBASIC3.77□□□□□ -1.81
GRIK1P39086 RNU1-100P-201ENST00000365255 165 ntBASIC3.77□□□□□ -1.81
GRIK1P39086 SNORA75.5-201ENST00000391291 81 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms