Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU6-1114P-201ENST00000516022 107 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 SNORA25.14-201ENST00000516481 132 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 RNU6-264P-201ENST00000517134 104 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCD3P28288 RRN3P3-201ENST00000549207 578 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 FRG2DP-202ENST00000566967 323 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCD3P28288 CYP2C61P-201ENST00000604072 290 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 SNORD11B-201ENST00000607707 90 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCD3P28288 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCD3P28288 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCD3P28288 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ABCD3P28288 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCD3P28288 RNU6-545P-201ENST00000362681 104 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 RNU6-873P-201ENST00000363833 107 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 Y_RNA.259-201ENST00000364619 101 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 RNU6-310P-201ENST00000384655 107 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 MT-TD-201ENST00000387419 68 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 Y_RNA.646-201ENST00000410980 101 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 AC004866.1-201ENST00000411748 78 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCD3P28288 RNU6-507P-201ENST00000516045 100 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 RNU6-1213P-201ENST00000517075 94 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.23□□□□□ -2.05
ABCD3P28288 AC004584.2-201ENST00000570407 410 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.23□□□□□ -2.05
ABCD3P28288 AC008873.1-201ENST00000625051 138 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ABCD3P28288 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
ABCD3P28288 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
ABCD3P28288 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCD3P28288 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ABCD3P28288 MIR449A-201ENST00000362113 91 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 Y_RNA.364-201ENST00000365532 101 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 RNU11-3P-201ENST00000391111 133 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 MTCO2P27-201ENST00000420740 428 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCD3P28288 AC139712.2-201ENST00000424302 339 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCD3P28288 MTCO1P44-201ENST00000441935 243 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCD3P28288 AC234781.5-201ENST00000508429 271 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCD3P28288 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCD3P28288 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
ABCD3P28288 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCD3P28288 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ABCD3P28288 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCD3P28288 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCD3P28288 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCD3P28288 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
ABCD3P28288 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ABCD3P28288 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
ABCD3P28288 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
ABCD3P28288 RNU4-82P-201ENST00000362443 140 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 Y_RNA.106-201ENST00000363189 100 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 RNA5SP493-201ENST00000364115 91 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 Y_RNA.356-201ENST00000365475 113 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 SNORA67.4-201ENST00000384688 142 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 MIR10B-201ENST00000385011 110 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.21□□□□□ -2.06
ABCD3P28288 AC092473.1-201ENST00000441098 221 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCD3P28288 UBE2V1P7-201ENST00000446395 340 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.21□□□□□ -2.06
ABCD3P28288 AC010531.2-201ENST00000465012 153 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 HMGN2P9-201ENST00000476875 229 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCD3P28288 RN7SL636P-201ENST00000497504 294 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 AC067942.3-201ENST00000512025 362 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 SUB1P3-201ENST00000564581 315 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 AL355375.2-201ENST00000574825 175 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 AL590240.4-201ENST00000616908 390 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 IGHVIII-44-202ENST00000636235 289 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
ABCD3P28288 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
ABCD3P28288 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
ABCD3P28288 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
ABCD3P28288 MTND5P16-201ENST00000460269 1703 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 SNORD114-6-201ENST00000364393 72 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 RNU6-793P-201ENST00000384233 104 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 Y_RNA.529-201ENST00000384586 119 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ABCD3P28288 RNY4P36-201ENST00000391116 96 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.2□□□□□ -2.06
ABCD3P28288 HMGN2P3-201ENST00000433603 273 ntBASIC2.2□□□□□ -2.06
ABCD3P28288 HMGN2P5-201ENST00000436882 273 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms