Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 Y_RNA.81-201ENST00000362997 102 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 MIR539-201ENST00000365690 78 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 SNORA20B-201ENST00000384220 132 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 MIR518C-201ENST00000384822 101 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AL606845.1-201ENST00000404881 255 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AC006461.1-201ENST00000412637 326 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AC006989.1-201ENST00000427212 131 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 MTND4LP9-201ENST00000427694 174 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AL121890.1-201ENST00000435457 205 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AL137159.1-201ENST00000452808 512 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 RNU7-14P-201ENST00000459331 62 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 RNU6-221P-201ENST00000459541 99 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AC083906.5-201ENST00000503722 328 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AC022695.1-201ENST00000522089 237 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AC007224.1-201ENST00000564410 144 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 MIR3646-201ENST00000578301 84 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AP003357.1-201ENST00000604497 148 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 MIR3658-201ENST00000636291 56 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 AC068647.2-201ENST00000637380 353 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 Z82209.1-201ENST00000422141 2135 ntBASIC3.22□□□□□ -1.89
SHISA3A0PJX4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.21□□□□□ -1.89
SHISA3A0PJX4 SNORA27.1-201ENST00000362604 124 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNA5SP205-201ENST00000364653 136 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 U8.7-201ENST00000364940 136 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNU6-1323P-201ENST00000384025 107 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNU6-975P-201ENST00000384296 105 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNA5SP424-201ENST00000390988 115 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 AL355796.1-201ENST00000406706 323 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 SNORA36B-201ENST00000410438 131 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 AL162151.2-201ENST00000448875 158 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RPS26P55-201ENST00000471178 356 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 AC010598.1-201ENST00000510378 103 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNA5SP272-201ENST00000516095 111 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 RNU7-116P-201ENST00000516940 62 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 AC112693.2-201ENST00000556538 232 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 ZYXP1-201ENST00000617638 118 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 AC022149.2-201ENST00000621061 203 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 AL354798.1-201ENST00000622505 329 ntBASIC3.21□□□□□ -1.9
SHISA3A0PJX4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHISA3A0PJX4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC068647.1-201ENST00000489539 2265 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 RNU6-234P-201ENST00000365229 104 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 MIR1193-201ENST00000408109 78 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 RNU4-43P-201ENST00000410628 137 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC010154.1-201ENST00000425857 269 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC117454.1-201ENST00000491120 168 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 RN7SKP21-201ENST00000516503 220 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 SCARNA14-201ENST00000516903 136 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC018630.3-201ENST00000542637 96 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC127455.1-201ENST00000565496 145 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 MIR3160-1-201ENST00000577972 85 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 LARP7P3-201ENST00000579888 337 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 MIR492-201ENST00000638676 116 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 AP001486.2-201ENST00000561652 5113 ntBASIC3.2□□□□□ -1.9
SHISA3A0PJX4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHISA3A0PJX4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHISA3A0PJX4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
SHISA3A0PJX4 MT-TT-201ENST00000387460 66 ntBASIC3.19□□□□□ -1.9
SHISA3A0PJX4 SNORD37.2-201ENST00000391075 66 ntBASIC3.19□□□□□ -1.9
SHISA3A0PJX4 SNORA57.1-201ENST00000391227 145 ntBASIC3.19□□□□□ -1.9
SHISA3A0PJX4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA3A0PJX4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA3A0PJX4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.19□□□□□ -1.9
SHISA3A0PJX4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA3A0PJX4 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
SHISA3A0PJX4 AC109329.2-201ENST00000519658 482 ntBASIC3.19□□□□□ -1.9
SHISA3A0PJX4 uc_338.32-201ENST00000615087 172 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 809.6 ms