Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SCN4AP35499 AC110760.3-201ENST00000598794 467 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN4AP35499 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SCN4AP35499 RNU6-655P-201ENST00000362858 107 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 RNU1-23P-201ENST00000363361 144 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 SNORD32A-201ENST00000364805 84 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 Y_RNA.332-201ENST00000365271 113 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 RNU11-5P-201ENST00000391216 129 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 RNA5SP212-201ENST00000391223 107 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 CALM2P3-201ENST00000400429 449 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AC096920.1-201ENST00000423991 241 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AL133396.1-201ENST00000432048 687 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 MTND1P1-201ENST00000445453 368 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 RPL39P29-201ENST00000447779 157 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 HSPE1P24-201ENST00000450782 238 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 RNU6-1132P-201ENST00000459214 107 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 RPS29P27-201ENST00000463711 170 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN4AP35499 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN4AP35499 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AC115990.1-201ENST00000526957 301 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AP005639.2-201ENST00000527592 928 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.24□□□□□ -2.21
SCN4AP35499 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN4AP35499 AC002044.1-201ENST00000606707 158 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AC004492.1-201ENST00000607036 742 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 AC004908.3-201ENST00000610248 625 ntBASIC1.24□□□□□ -2.21
SCN4AP35499 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SCN4AP35499 AC092268.1-201ENST00000342691 405 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 SNORD113-7-201ENST00000363762 77 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 SNORA16B-201ENST00000364674 135 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 Y_RNA.378-201ENST00000365652 113 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN4AP35499 RNU6-1068P-201ENST00000410958 103 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN4AP35499 AL358934.1-201ENST00000432346 324 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AC000111.3-201ENST00000433478 193 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 MTND1P29-201ENST00000448112 647 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AC107032.1-201ENST00000485945 480 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AC008628.2-201ENST00000502605 298 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 HMGB1P35-201ENST00000503360 598 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AC019235.1-201ENST00000503847 207 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AC022447.4-201ENST00000504053 364 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 RNU2-69P-201ENST00000516061 100 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN4AP35499 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 CYP4A27P-201ENST00000567218 190 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 MIR4713-201ENST00000582691 75 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AL133215.3-201ENST00000609801 448 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 AC010487.4-201ENST00000637027 61 ntBASIC1.23□□□□□ -2.21
SCN4AP35499 RNU4-15P-201ENST00000362613 141 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 Y_RNA.251-201ENST00000364551 99 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 RNU6-611P-201ENST00000384276 104 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN4AP35499 MTND3P21-201ENST00000433774 331 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 RPS27P1-201ENST00000450552 247 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 Y_RNA.682-201ENST00000516457 100 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 CENPUP1-201ENST00000526649 1202 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 MTCO3P23-201ENST00000561363 289 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 MIR3672-201ENST00000584290 82 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 MIR3611-201ENST00000584484 83 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC010900.2-201ENST00000604508 210 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC109347.2-201ENST00000610220 349 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 LINC02555-201ENST00000563933 1951 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 RNU6-266P-201ENST00000364225 107 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 RNU6-214P-201ENST00000384130 107 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 SNORD14D-201ENST00000384390 87 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 RNU4-55P-201ENST00000410731 137 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 MTCO3P41-201ENST00000414801 328 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SCN4AP35499 AL590556.1-201ENST00000423231 483 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN4AP35499 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN4AP35499 AC018868.1-201ENST00000491307 315 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC016632.1-201ENST00000503994 196 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 MIR1273G-201ENST00000577677 100 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 BNIP3P25-201ENST00000596023 559 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC103591.3-201ENST00000608684 209 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC064836.2-201ENST00000609491 462 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 PCGEM1.1-201ENST00000613431 131 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 TCL6_2.1-201ENST00000615162 119 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 AC006504.8-201ENST00000621046 635 ntBASIC1.22□□□□□ -2.21
SCN4AP35499 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 RNA5SP257-201ENST00000363023 116 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 SNORD114-23-201ENST00000363536 72 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 Y_RNA.151-201ENST00000363566 112 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 RNU6-1085P-201ENST00000363576 107 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 RNA5SP493-201ENST00000364115 91 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 RNU6-715P-201ENST00000365204 103 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 RNU6-933P-201ENST00000384424 107 ntBASIC1.21□□□□□ -2.22
SCN4AP35499 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms