Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
PTX3P26022 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTX3P26022 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTX3P26022 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.13□□□□□ -1.91
PTX3P26022 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
PTX3P26022 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTX3P26022 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PTX3P26022 RNU1-33P-201ENST00000364249 162 ntBASIC3.13□□□□□ -1.91
PTX3P26022 Y_RNA.498-201ENST00000384460 102 ntBASIC3.13□□□□□ -1.91
PTX3P26022 Y_RNA.541-201ENST00000384640 113 ntBASIC3.13□□□□□ -1.91
PTX3P26022 RNU6-21P-201ENST00000384710 107 ntBASIC3.13□□□□□ -1.91
PTX3P26022 MIR549A-201ENST00000385268 96 ntBASIC3.13□□□□□ -1.91
PTX3P26022 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PTX3P26022 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.13□□□□□ -1.91
PTX3P26022 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.13□□□□□ -1.91
PTX3P26022 AC027124.2-201ENST00000428249 105 ntBASIC3.13□□□□□ -1.91
PTX3P26022 AC004386.2-201ENST00000441858 148 ntBASIC3.13□□□□□ -1.91
PTX3P26022 AC009237.7-201ENST00000447357 229 ntBASIC3.13□□□□□ -1.91
PTX3P26022 RPL21P10-201ENST00000463521 490 ntBASIC3.13□□□□□ -1.91
PTX3P26022 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.13□□□□□ -1.91
PTX3P26022 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
PTX3P26022 Y_RNA.680-201ENST00000516441 93 ntBASIC3.13□□□□□ -1.91
PTX3P26022 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
PTX3P26022 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
PTX3P26022 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.13□□□□□ -1.91
PTX3P26022 AC018448.1-201ENST00000552843 316 ntBASIC3.13□□□□□ -1.91
PTX3P26022 AC005176.2-201ENST00000596933 147 ntBASIC3.13□□□□□ -1.91
PTX3P26022 AC141273.2-201ENST00000618989 130 ntBASIC3.13□□□□□ -1.91
PTX3P26022 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.13□□□□□ -1.91
PTX3P26022 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PTX3P26022 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTX3P26022 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTX3P26022 Y_RNA.20-201ENST00000362479 113 ntBASIC3.12□□□□□ -1.91
PTX3P26022 RNU1-70P-201ENST00000362618 164 ntBASIC3.12□□□□□ -1.91
PTX3P26022 Y_RNA.60-201ENST00000362831 98 ntBASIC3.12□□□□□ -1.91
PTX3P26022 Y_RNA.352-201ENST00000365439 102 ntBASIC3.12□□□□□ -1.91
PTX3P26022 RNU6-1310P-201ENST00000384153 107 ntBASIC3.12□□□□□ -1.91
PTX3P26022 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
PTX3P26022 AL033519.2-201ENST00000403958 392 ntBASIC3.12□□□□□ -1.91
PTX3P26022 RPL23AP36-201ENST00000413895 458 ntBASIC3.12□□□□□ -1.91
PTX3P26022 HSPE1P25-201ENST00000455484 251 ntBASIC3.12□□□□□ -1.91
PTX3P26022 RNU6-625P-201ENST00000459412 107 ntBASIC3.12□□□□□ -1.91
PTX3P26022 RNU7-110P-201ENST00000516891 62 ntBASIC3.12□□□□□ -1.91
PTX3P26022 RRN3P3-201ENST00000549207 578 ntBASIC3.12□□□□□ -1.91
PTX3P26022 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.12□□□□□ -1.91
PTX3P26022 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.12□□□□□ -1.91
PTX3P26022 SNORD11B-201ENST00000607707 90 ntBASIC3.12□□□□□ -1.91
PTX3P26022 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
PTX3P26022 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
PTX3P26022 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.12□□□□□ -1.91
PTX3P26022 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTX3P26022 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTX3P26022 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTX3P26022 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTX3P26022 MIR410-201ENST00000362222 80 ntBASIC3.11□□□□□ -1.91
PTX3P26022 RNA5SP119-201ENST00000362715 117 ntBASIC3.11□□□□□ -1.91
PTX3P26022 SNORD32B-201ENST00000364460 84 ntBASIC3.11□□□□□ -1.91
PTX3P26022 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
PTX3P26022 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
PTX3P26022 SNORA53-201ENST00000391141 249 ntBASIC3.11□□□□□ -1.91
PTX3P26022 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTX3P26022 U6atac.2-201ENST00000408644 118 ntBASIC3.11□□□□□ -1.91
PTX3P26022 ELOCP21-201ENST00000412558 336 ntBASIC3.11□□□□□ -1.91
PTX3P26022 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
PTX3P26022 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
PTX3P26022 HSPE1P18-201ENST00000517602 280 ntBASIC3.11□□□□□ -1.91
PTX3P26022 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
PTX3P26022 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
PTX3P26022 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
PTX3P26022 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.11□□□□□ -1.91
PTX3P26022 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PTX3P26022 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PTX3P26022 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTX3P26022 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.11□□□□□ -1.91
PTX3P26022 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PTX3P26022 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PTX3P26022 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
PTX3P26022 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTX3P26022 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTX3P26022 RNU6-1175P-201ENST00000365200 107 ntBASIC3.1□□□□□ -1.91
PTX3P26022 RNU6-326P-201ENST00000365480 107 ntBASIC3.1□□□□□ -1.91
PTX3P26022 SNORA18.2-201ENST00000383865 132 ntBASIC3.1□□□□□ -1.91
PTX3P26022 RNU6-102P-201ENST00000384485 104 ntBASIC3.1□□□□□ -1.91
PTX3P26022 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
PTX3P26022 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.1□□□□□ -1.91
PTX3P26022 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
PTX3P26022 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
PTX3P26022 RPL27AP5-201ENST00000469428 449 ntBASIC3.1□□□□□ -1.91
PTX3P26022 AC108043.1-201ENST00000512696 574 ntBASIC3.1□□□□□ -1.91
PTX3P26022 SERF1AP1-201ENST00000514575 187 ntBASIC3.1□□□□□ -1.91
PTX3P26022 RNU2-44P-201ENST00000516795 194 ntBASIC3.1□□□□□ -1.91
PTX3P26022 SCARNA3-201ENST00000517097 143 ntBASIC3.1□□□□□ -1.91
PTX3P26022 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
PTX3P26022 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.1□□□□□ -1.91
PTX3P26022 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.1□□□□□ -1.91
PTX3P26022 MIR5006-201ENST00000583027 110 ntBASIC3.1□□□□□ -1.91
PTX3P26022 AC037487.3-201ENST00000606668 112 ntBASIC3.1□□□□□ -1.91
PTX3P26022 MIR7515-201ENST00000637837 67 ntBASIC3.1□□□□□ -1.91
PTX3P26022 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PTX3P26022 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms