Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPHS1O60500 AL157777.2-201ENST00000258070 137 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 snoU2_19.1-201ENST00000362361 80 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 RNU6-454P-201ENST00000364292 107 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 Y_RNA.308-201ENST00000365043 101 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 RN7SKP111-201ENST00000410349 271 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 AC024067.1-201ENST00000426199 223 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 AC092017.2-201ENST00000427600 362 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 RPS29P7-201ENST00000439662 171 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 RPL31P41-201ENST00000477967 372 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 RPL36AP48-201ENST00000485521 314 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.33□□□□□ -1.88
NPHS1O60500 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHS1O60500 MIR5006-201ENST00000583027 110 ntBASIC3.33□□□□□ -1.88
NPHS1O60500 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHS1O60500 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHS1O60500 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NPHS1O60500 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHS1O60500 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPHS1O60500 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPHS1O60500 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHS1O60500 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NPHS1O60500 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 Y_RNA.233-201ENST00000364407 101 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 RNU6-1264P-201ENST00000383891 107 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 RNU6-211P-201ENST00000384047 107 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHS1O60500 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHS1O60500 RNU6-789P-201ENST00000517105 102 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 RNU2-12P-201ENST00000517216 168 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHS1O60500 SNORA51-201ENST00000606420 132 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 SNORD11B-201ENST00000607707 90 ntBASIC3.32□□□□□ -1.88
NPHS1O60500 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHS1O60500 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NPHS1O60500 Y_RNA.329-201ENST00000365209 107 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 RNA5SP504-201ENST00000410676 117 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHS1O60500 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHS1O60500 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 RNU6-344P-201ENST00000516635 111 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 RNU1-117P-201ENST00000517041 158 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.31□□□□□ -1.88
NPHS1O60500 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPHS1O60500 AC027176.1-201ENST00000560204 514 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 MIR4308-201ENST00000580634 81 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 VN1R85P-201ENST00000601587 426 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 AL020997.2-201ENST00000602607 184 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 uc_338.14-201ENST00000613162 166 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 AC000403.1-201ENST00000613696 3585 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPHS1O60500 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.31□□□□□ -1.88
NPHS1O60500 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
NPHS1O60500 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
NPHS1O60500 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NPHS1O60500 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NPHS1O60500 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPHS1O60500 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 Y_RNA.506-201ENST00000384494 102 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 RNU6-125P-201ENST00000384505 107 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 MIR767-201ENST00000390228 109 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 SNORA12-201ENST00000391162 147 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AL035423.1-201ENST00000420331 213 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 OOSP1P1-201ENST00000423265 274 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 Z98742.2-201ENST00000431564 187 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.3□□□□□ -1.88
NPHS1O60500 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AC006445.1-201ENST00000491925 405 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 Y_RNA.662-201ENST00000516028 97 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 RNU6-436P-201ENST00000516171 114 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 RNU2-44P-201ENST00000516795 194 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 Y_RNA.703-201ENST00000516846 111 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 HSPE1P18-201ENST00000517602 280 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AC006380.1-201ENST00000603598 186 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AL365265.1-201ENST00000621045 234 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPHS1O60500 AC021753.1-201ENST00000635724 168 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPHS1O60500 AC069528.2-201ENST00000624849 1991 ntBASIC3.3□□□□□ -1.88
NPHS1O60500 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
NPHS1O60500 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPHS1O60500 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.3□□□□□ -1.88
NPHS1O60500 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.3□□□□□ -1.88
NPHS1O60500 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPHS1O60500 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHS1O60500 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPHS1O60500 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPHS1O60500 RNU6-1272P-201ENST00000362776 107 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 Y_RNA.262-201ENST00000364641 102 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NPHS1O60500 SNORA57.1-201ENST00000391227 145 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NPHS1O60500 U3.40-201ENST00000408706 208 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms