Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 MIR549A-201ENST00000385268 96 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MIR454-201ENST00000390180 115 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 CALM2P3-201ENST00000400429 449 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC004866.1-201ENST00000411748 78 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MTCO1P21-201ENST00000416634 589 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNX2P2-201ENST00000424553 323 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL589823.1-201ENST00000429577 183 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 GPR143P-201ENST00000434155 205 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC069257.2-201ENST00000441819 155 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 DYNLT3P2-201ENST00000442517 295 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL033528.1-201ENST00000453780 140 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL133373.1-201ENST00000497098 94 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-1178P-201ENST00000516674 107 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNA5SP102-201ENST00000516865 106 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC026407.1-201ENST00000518369 204 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC019176.1-201ENST00000518519 225 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 ADI1P3-201ENST00000549509 470 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 CYP3A52P-201ENST00000563326 91 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC006362.1-201ENST00000567392 174 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNORA59B-202ENST00000578183 701 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC121247.2-201ENST00000604776 136 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 Z69908.1-201ENST00000622603 247 ntBASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.74□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-179P-201ENST00000363350 107 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 Y_RNA.324-201ENST00000365165 102 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNORD116-1-201ENST00000384335 95 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNORD70.1-201ENST00000391007 85 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-1148P-201ENST00000410992 104 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC133104.1-201ENST00000429100 218 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL591043.1-201ENST00000432461 424 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNAP23P1-201ENST00000433229 246 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL596276.1-201ENST00000434465 418 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RPS29P27-201ENST00000463711 170 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC010424.1-201ENST00000506336 297 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 Y_RNA.695-201ENST00000516715 107 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AP002963.1-201ENST00000530590 184 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC103996.1-201ENST00000555468 102 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SUB1P2-201ENST00000556401 297 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MIR3136-201ENST00000583498 78 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC010620.1-201ENST00000601088 1102 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL359999.1-201ENST00000604513 294 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 BNIP3P10-201ENST00000605360 577 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC092954.2-201ENST00000609103 430 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 HULC.1-201ENST00000612720 240 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 FAM157A-202ENST00000615155 405 ntBASIC0.73□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MTND5P17-201ENST00000418405 1603 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 Y_RNA.51-201ENST00000362725 102 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-266P-201ENST00000364225 107 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNORA63D-201ENST00000364359 132 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-522P-201ENST00000364497 107 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 Y_RNA.372-201ENST00000365599 102 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SNORA18.2-201ENST00000383865 132 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-142P-201ENST00000384019 107 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-43P-201ENST00000384302 107 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-1119P-201ENST00000384349 108 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-456P-201ENST00000384493 107 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AF228730.1-201ENST00000397972 663 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MIR450B-201ENST00000401182 78 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU2-66P-201ENST00000410650 161 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNA5SP111-201ENST00000411386 101 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MTCO3P41-201ENST00000414801 328 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 CDK8P2-201ENST00000415020 547 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL606489.2-201ENST00000433886 234 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 SCARNA18-201ENST00000459004 134 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-261P-201ENST00000459506 102 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC114982.1-201ENST00000469402 321 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 MTCO3P7-201ENST00000510008 774 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
IGKV1D-43A0A0B4J1Z2 RNU6-835P-201ENST00000516974 104 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms