Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
PTX3P26022 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
PTX3P26022 MIR548H3-201ENST00000408771 118 ntBASIC3.17□□□□□ -1.9
PTX3P26022 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
PTX3P26022 MICF-203ENST00000432679 129 ntBASIC3.17□□□□□ -1.9
PTX3P26022 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
PTX3P26022 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.17□□□□□ -1.9
PTX3P26022 AC117440.1-201ENST00000474107 571 ntBASIC3.17□□□□□ -1.9
PTX3P26022 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
PTX3P26022 SEM1P1-201ENST00000506694 209 ntBASIC3.17□□□□□ -1.9
PTX3P26022 SEPT14P8-201ENST00000508026 178 ntBASIC3.17□□□□□ -1.9
PTX3P26022 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.17□□□□□ -1.9
PTX3P26022 RNU6-496P-201ENST00000516145 99 ntBASIC3.17□□□□□ -1.9
PTX3P26022 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
PTX3P26022 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
PTX3P26022 MIR3158-1-201ENST00000583596 81 ntBASIC3.17□□□□□ -1.9
PTX3P26022 AC008739.2-201ENST00000597006 317 ntBASIC3.17□□□□□ -1.9
PTX3P26022 AL670379.2-201ENST00000604983 252 ntBASIC3.17□□□□□ -1.9
PTX3P26022 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
PTX3P26022 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.17□□□□□ -1.9
PTX3P26022 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTX3P26022 Z83843.1-201ENST00000604070 3685 ntBASIC3.16□□□□□ -1.9
PTX3P26022 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTX3P26022 Y_RNA.552-201ENST00000384665 112 ntBASIC3.16□□□□□ -1.9
PTX3P26022 SNORA46.1-201ENST00000391069 153 ntBASIC3.16□□□□□ -1.9
PTX3P26022 RNU2-20P-201ENST00000410425 191 ntBASIC3.16□□□□□ -1.9
PTX3P26022 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.16□□□□□ -1.9
PTX3P26022 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
PTX3P26022 AC091179.3-201ENST00000474761 144 ntBASIC3.16□□□□□ -1.9
PTX3P26022 RNU6-344P-201ENST00000516635 111 ntBASIC3.16□□□□□ -1.9
PTX3P26022 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.16□□□□□ -1.9
PTX3P26022 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.16□□□□□ -1.9
PTX3P26022 AC005357.1-201ENST00000588399 301 ntBASIC3.16□□□□□ -1.9
PTX3P26022 AC012433.1-201ENST00000588916 398 ntBASIC3.16□□□□□ -1.9
PTX3P26022 RPL30P11-203ENST00000598995 310 ntBASIC3.16□□□□□ -1.9
PTX3P26022 MZT1P2-201ENST00000604387 248 ntBASIC3.16□□□□□ -1.9
PTX3P26022 AC073657.2-201ENST00000605661 303 ntBASIC3.16□□□□□ -1.9
PTX3P26022 TCL6_2.1-201ENST00000615162 119 ntBASIC3.16□□□□□ -1.9
PTX3P26022 AC005562.2-201ENST00000618264 111 ntBASIC3.16□□□□□ -1.9
PTX3P26022 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.9
PTX3P26022 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PTX3P26022 MIR148B-201ENST00000362252 99 ntBASIC3.15□□□□□ -1.91
PTX3P26022 snoU2_19.1-201ENST00000362361 80 ntBASIC3.15□□□□□ -1.91
PTX3P26022 Y_RNA.237-201ENST00000364439 102 ntBASIC3.15□□□□□ -1.91
PTX3P26022 SNORA20.1-201ENST00000364790 130 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RNU6-20P-201ENST00000384106 107 ntBASIC3.15□□□□□ -1.91
PTX3P26022 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTX3P26022 Y_RNA.602-201ENST00000410535 92 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
PTX3P26022 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTX3P26022 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.15□□□□□ -1.91
PTX3P26022 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
PTX3P26022 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.15□□□□□ -1.91
PTX3P26022 UQCRBP2-201ENST00000447827 297 ntBASIC3.15□□□□□ -1.91
PTX3P26022 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RN7SL293P-201ENST00000481765 281 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RNU6-1338P-201ENST00000516328 91 ntBASIC3.15□□□□□ -1.91
PTX3P26022 SNORA67.7-201ENST00000516664 135 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RNU6-388P-201ENST00000517012 105 ntBASIC3.15□□□□□ -1.91
PTX3P26022 RNU6-389P-201ENST00000517048 105 ntBASIC3.15□□□□□ -1.91
PTX3P26022 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.15□□□□□ -1.91
PTX3P26022 MIR3128-201ENST00000581957 66 ntBASIC3.15□□□□□ -1.91
PTX3P26022 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
PTX3P26022 AC011373.1-201ENST00000607270 237 ntBASIC3.15□□□□□ -1.91
PTX3P26022 AL357075.2-201ENST00000614906 189 ntBASIC3.15□□□□□ -1.91
PTX3P26022 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
PTX3P26022 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTX3P26022 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTX3P26022 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTX3P26022 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
PTX3P26022 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTX3P26022 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
PTX3P26022 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTX3P26022 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTX3P26022 RNU6-961P-201ENST00000363893 105 ntBASIC3.14□□□□□ -1.91
PTX3P26022 Y_RNA.257-201ENST00000364596 102 ntBASIC3.14□□□□□ -1.91
PTX3P26022 RNU6-290P-201ENST00000365212 101 ntBASIC3.14□□□□□ -1.91
PTX3P26022 Y_RNA.416-201ENST00000384014 113 ntBASIC3.14□□□□□ -1.91
PTX3P26022 Y_RNA.570-201ENST00000384750 101 ntBASIC3.14□□□□□ -1.91
PTX3P26022 MIR449B-201ENST00000384995 97 ntBASIC3.14□□□□□ -1.91
PTX3P26022 RNU6-907P-201ENST00000390924 102 ntBASIC3.14□□□□□ -1.91
PTX3P26022 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.14□□□□□ -1.91
PTX3P26022 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
PTX3P26022 ARL5AP4-201ENST00000430731 512 ntBASIC3.14□□□□□ -1.91
PTX3P26022 IFNA11P-201ENST00000446352 526 ntBASIC3.14□□□□□ -1.91
PTX3P26022 MTND4LP30-201ENST00000454092 297 ntBASIC3.14□□□□□ -1.91
PTX3P26022 SNORA84-201ENST00000459229 133 ntBASIC3.14□□□□□ -1.91
PTX3P26022 MTND1P19-201ENST00000511780 315 ntBASIC3.14□□□□□ -1.91
PTX3P26022 AC245166.1-201ENST00000521012 253 ntBASIC3.14□□□□□ -1.91
PTX3P26022 DEFB108E-201ENST00000524692 240 ntBASIC3.14□□□□□ -1.91
PTX3P26022 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.14□□□□□ -1.91
PTX3P26022 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
PTX3P26022 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.14□□□□□ -1.91
PTX3P26022 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
PTX3P26022 AC006133.1-201ENST00000617106 264 ntBASIC3.14□□□□□ -1.91
PTX3P26022 AC127459.3-201ENST00000624328 466 ntBASIC3.14□□□□□ -1.91
PTX3P26022 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.14□□□□□ -1.91
PTX3P26022 MIR7157-201ENST00000635801 60 ntBASIC3.14□□□□□ -1.91
PTX3P26022 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms