Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC243964.1-201ENST00000441814 261 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.86□□□□□ -2.11
HDAC3O15379 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.86□□□□□ -2.11
HDAC3O15379 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.86□□□□□ -2.11
HDAC3O15379 RPS29P27-201ENST00000463711 170 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AC018437.1-201ENST00000492214 406 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AC091874.1-201ENST00000511402 339 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 Y_RNA.670-201ENST00000516255 105 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 Y_RNA.718-201ENST00000517110 102 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AC109479.2-201ENST00000517842 174 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AC013412.1-201ENST00000610687 192 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 MIR219B-201ENST00000637023 88 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HDAC3O15379 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.85□□□□□ -2.11
HDAC3O15379 RNU6-527P-201ENST00000363425 104 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RNU6-842P-201ENST00000384269 107 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RNU6-1297P-201ENST00000384415 104 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 MIR517A-201ENST00000385001 87 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 Y_RNA.594-201ENST00000410373 140 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RNU6-293P-201ENST00000411259 106 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.85□□□□□ -2.11
HDAC3O15379 MTND1P14-201ENST00000427400 950 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.85□□□□□ -2.11
HDAC3O15379 AL445646.1-201ENST00000431784 216 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AL645568.3-201ENST00000433683 316 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RPL23AP3-201ENST00000453844 468 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 MTCO3P10-201ENST00000455912 772 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RPL7P42-201ENST00000481005 679 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC116337.1-201ENST00000509680 687 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RNU6-1016P-201ENST00000516689 94 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.85□□□□□ -2.11
HDAC3O15379 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.85□□□□□ -2.11
HDAC3O15379 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.85□□□□□ -2.11
HDAC3O15379 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HDAC3O15379 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
HDAC3O15379 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.85□□□□□ -2.11
HDAC3O15379 AL356055.1-201ENST00000602528 446 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC018462.2-201ENST00000605375 395 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 MIR3976-201ENST00000606807 139 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC009229.3-201ENST00000608056 282 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.85□□□□□ -2.11
HDAC3O15379 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.85□□□□□ -2.11
HDAC3O15379 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HDAC3O15379 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
HDAC3O15379 Y_RNA.138-201ENST00000363462 102 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 RNU6-1188P-201ENST00000363795 107 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HDAC3O15379 Y_RNA.384-201ENST00000383909 102 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 Y_RNA.482-201ENST00000384377 111 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 RNU6-310P-201ENST00000384655 107 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 Y_RNA.579-201ENST00000390939 94 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 RNY4P36-201ENST00000391116 96 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HDAC3O15379 U6atac.2-201ENST00000408644 118 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 Y_RNA.646-201ENST00000410980 101 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 Z82205.1-201ENST00000428456 297 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 MTND3P9-201ENST00000429526 346 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 Z98742.2-201ENST00000431564 187 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.84□□□□□ -2.11
HDAC3O15379 AC112771.1-201ENST00000463581 102 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 RNU6-120P-201ENST00000516077 103 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.84□□□□□ -2.11
HDAC3O15379 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 CPDP1-201ENST00000579660 283 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 BNIP3P16-201ENST00000589779 534 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AC011494.1-201ENST00000596454 237 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AP000654.2-201ENST00000605633 586 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AC124303.1-201ENST00000605703 360 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AL133215.3-201ENST00000609801 448 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 AL669831.3-213ENST00000636676 183 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 MIR3529-201ENST00000637713 78 ntBASIC1.84□□□□□ -2.11
HDAC3O15379 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.84□□□□□ -2.12
HDAC3O15379 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.83□□□□□ -2.12
HDAC3O15379 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HDAC3O15379 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HDAC3O15379 RNU1-72P-201ENST00000362976 153 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 Y_RNA.132-201ENST00000363421 102 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 SNORD32A-201ENST00000364805 84 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 Y_RNA.315-201ENST00000365117 102 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RNU6-487P-201ENST00000365430 104 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 SNORA75.4-201ENST00000391278 119 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RNU6-1050P-201ENST00000410388 107 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RNU2-20P-201ENST00000410425 191 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 MTND4P28-201ENST00000426217 387 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 AL133396.1-201ENST00000432048 687 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RPS15AP10-201ENST00000432472 382 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 AC006026.2-201ENST00000457376 180 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 SNORD5.1-201ENST00000458800 75 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RPL9P9-202ENST00000466501 579 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RPL30P12-201ENST00000474666 353 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 268.9 ms