Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 MIR3145-201ENST00000580727 82 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 AL034408.1-202ENST00000636088 415 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 MIR3674-201ENST00000636576 68 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AC010680.1-201ENST00000590024 3590 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU1-18P-201ENST00000363062 164 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.233-201ENST00000364407 101 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU6-923P-201ENST00000364753 107 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.506-201ENST00000384494 102 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU6-125P-201ENST00000384505 107 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 SNORA19-201ENST00000384737 128 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU6-750P-201ENST00000390946 107 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU6-918P-201ENST00000391219 106 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNA5SP201-201ENST00000410316 124 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AC096649.2-201ENST00000416186 393 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AIMP1P2-201ENST00000425294 312 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AP001324.2-201ENST00000461163 319 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.662-201ENST00000516028 97 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNU6-191P-201ENST00000516295 94 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 RNY3P16-201ENST00000516338 101 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 AP002001.1-203ENST00000534002 267 ntBASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCHD1Q96NR3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RNU2-54P-201ENST00000410299 190 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RNA5SP475-201ENST00000410568 110 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RN7SKP51-201ENST00000410781 304 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 AC104619.4-201ENST00000510773 249 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RNU6-1278P-201ENST00000516130 107 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RN7SKP83-201ENST00000516512 178 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 AP005660.1-201ENST00000522972 293 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 MIR3910-1-201ENST00000580936 111 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 AL391813.1-201ENST00000603098 260 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 AC018692.3-201ENST00000623929 123 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 U6.106-201ENST00000636360 105 ntBASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCHD1Q96NR3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 SNORA73.2-201ENST00000364946 201 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.308-201ENST00000365043 101 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 RNA5SP252-201ENST00000391131 119 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 AC024067.1-201ENST00000426199 223 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 RPL23AP70-201ENST00000483361 460 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 AC244205.2-202ENST00000635781 342 ntBASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCHD1Q96NR3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 RNU4-15P-201ENST00000362613 141 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC009963.1-201ENST00000417265 157 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 TGIF1P1-201ENST00000558095 802 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC027176.1-201ENST00000560204 514 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 MIR4429-201ENST00000580105 73 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC011471.1-201ENST00000585766 187 ntBASIC3.41□□□□□ -1.86
PTCHD1Q96NR3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms