Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 MTND5P16-201ENST00000460269 1703 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.358-201ENST00000365491 99 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.557-201ENST00000384680 107 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 MIR628-201ENST00000385229 95 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RNU1-139P-201ENST00000391307 165 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL358176.2-201ENST00000425769 204 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 TOMM22P6-201ENST00000465035 409 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL121594.1-201ENST00000475906 575 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SNORA31.16-201ENST00000516773 139 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RNA5SP54-201ENST00000516951 92 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL034555.1-201ENST00000604816 211 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL078596.1-201ENST00000624856 447 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Z75746.1-201ENST00000440243 2080 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.27-201ENST00000362540 103 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-486P-201ENST00000363116 107 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNY3P11-201ENST00000364153 102 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.551-201ENST00000384661 102 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 MIR1252-201ENST00000408861 65 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 EIF4EP4-201ENST00000424916 578 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RPS3P1-201ENST00000456781 192 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RPS29P12-201ENST00000460178 152 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC007215.1-201ENST00000464893 276 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-1114P-201ENST00000516022 107 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC040926.1-201ENST00000530195 238 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL442163.3-201ENST00000554110 156 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL117187.1-201ENST00000555482 181 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL355297.3-201ENST00000604082 446 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC124312.5-201ENST00000604451 268 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL021879.1-201ENST00000611756 288 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.133-201ENST00000363428 110 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.152-201ENST00000363578 100 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU4-50P-201ENST00000364361 141 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-541P-201ENST00000384709 110 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-1105P-201ENST00000384774 107 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNA5SP213-201ENST00000391031 106 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P75-201ENST00000396599 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P28-201ENST00000401418 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RN7SKP58-201ENST00000411010 305 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AL590556.1-201ENST00000423231 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 USP9YP16-201ENST00000430287 407 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 MTCO3P8-201ENST00000453691 755 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AP000705.1-201ENST00000454567 350 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 USP9YP23-201ENST00000455085 407 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU7-87P-201ENST00000459343 62 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P39-201ENST00000463605 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC087190.1-201ENST00000484462 480 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC107032.1-201ENST00000485945 480 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC132942.1-201ENST00000486753 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC093591.1-201ENST00000491435 481 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P16-201ENST00000495531 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU2-53P-201ENST00000516257 147 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-58P-201ENST00000517143 103 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AP002770.2-201ENST00000543613 532 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC027288.2-201ENST00000553028 243 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC027176.1-201ENST00000560204 514 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPS29P30-201ENST00000600975 111 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms