Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC233702.2-202ENST00000562547 291 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AC055872.1-201ENST00000570978 278 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 MIR5680-201ENST00000577577 84 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
EPHB3P54753 AC005000.2-201ENST00000605468 310 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AL110115.1-201ENST00000614396 364 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 AL357075.2-201ENST00000614906 189 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
EPHB3P54753 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
EPHB3P54753 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
EPHB3P54753 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.57□□□□□ -1.84
EPHB3P54753 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
EPHB3P54753 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.57□□□□□ -1.84
EPHB3P54753 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
EPHB3P54753 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.57□□□□□ -1.84
EPHB3P54753 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EPHB3P54753 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
EPHB3P54753 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
EPHB3P54753 Y_RNA.7-201ENST00000362352 102 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 RNU4-84P-201ENST00000364200 139 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AC092047.1-201ENST00000424997 240 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AL512844.2-201ENST00000433990 593 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AC007969.2-201ENST00000441891 191 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AL357552.1-201ENST00000445254 415 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AC009237.8-201ENST00000445492 379 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 MTATP6P7-201ENST00000453315 681 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 RNU7-170P-201ENST00000459303 61 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 RN7SL93P-201ENST00000463035 293 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 RPL23AP14-201ENST00000468281 468 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AC097462.2-201ENST00000504623 481 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.56□□□□□ -1.84
EPHB3P54753 HMGB3P3-201ENST00000510526 400 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.56□□□□□ -1.84
EPHB3P54753 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.56□□□□□ -1.84
EPHB3P54753 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.56□□□□□ -1.84
EPHB3P54753 snoU18.1-201ENST00000629629 71 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 U2.21-201ENST00000637295 81 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.56□□□□□ -1.84
EPHB3P54753 AC008568.2-201ENST00000623862 2313 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.56□□□□□ -1.84
EPHB3P54753 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.56□□□□□ -1.84
EPHB3P54753 AC110491.1-201ENST00000562191 2010 ntBASIC3.56□□□□□ -1.84
EPHB3P54753 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
EPHB3P54753 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EPHB3P54753 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EPHB3P54753 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHB3P54753 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 Y_RNA.75-201ENST00000362927 97 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 Y_RNA.121-201ENST00000363309 113 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 RNU6-283P-201ENST00000364788 107 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 SNORA40.19-201ENST00000390846 128 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 YPEL5P1-201ENST00000419731 367 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 SNORA70.19-201ENST00000516717 90 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHB3P54753 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.55□□□□□ -1.84
EPHB3P54753 AL162713.1-201ENST00000604480 262 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 MIR8057-201ENST00000620957 69 ntBASIC3.55□□□□□ -1.84
EPHB3P54753 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHB3P54753 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.55□□□□□ -1.84
EPHB3P54753 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
EPHB3P54753 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHB3P54753 RNU6-1272P-201ENST00000362776 107 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 RNU4-80P-201ENST00000363200 141 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 SNORD6-201ENST00000365444 73 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 RNU6-898P-201ENST00000365627 104 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 Y_RNA.412-201ENST00000384001 104 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 RNU6-658P-201ENST00000384606 106 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHB3P54753 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHB3P54753 AC008267.6-201ENST00000441664 139 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHB3P54753 RPS29P2-201ENST00000479278 136 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 RNU5F-8P-201ENST00000515941 111 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 RNU6-966P-201ENST00000516479 104 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 AC012493.2-201ENST00000595083 291 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 AL008718.3-201ENST00000610217 321 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.54□□□□□ -1.84
EPHB3P54753 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
EPHB3P54753 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
EPHB3P54753 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHB3P54753 AC073073.2-201ENST00000609827 2578 ntBASIC3.54□□□□□ -1.84
EPHB3P54753 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.53□□□□□ -1.84
EPHB3P54753 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
EPHB3P54753 RNU1-18P-201ENST00000363062 164 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 Y_RNA.238-201ENST00000364441 102 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 RNU6-1141P-201ENST00000364520 107 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 SNORD116-20-201ENST00000384529 92 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 RNU6-140P-201ENST00000384566 108 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 MIR569-201ENST00000385228 96 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 Y_RNA.595-201ENST00000410403 105 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms