Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC244517.12-201ENST00000623581 663 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 MTND4LP32-201ENST00000636111 270 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
HDAC3O15379 MTND5P30-201ENST00000452896 1731 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HDAC3O15379 Y_RNA.151-201ENST00000363566 112 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 RNU6-1059P-201ENST00000363752 98 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 RNU6-19P-201ENST00000384718 107 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AC074085.1-201ENST00000413598 418 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 FABP5P14-201ENST00000437273 393 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 MTCO1P29-201ENST00000496868 288 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AC096745.1-201ENST00000509945 370 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 APOOP3-201ENST00000536787 586 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.89□□□□□ -2.11
HDAC3O15379 AC007151.1-201ENST00000572774 483 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AC100830.2-201ENST00000581636 240 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AC113139.1-201ENST00000605049 239 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AL050343.2-201ENST00000607338 280 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 AC064859.1-201ENST00000624741 174 ntBASIC1.89□□□□□ -2.11
HDAC3O15379 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.89□□□□□ -2.11
HDAC3O15379 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
HDAC3O15379 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HDAC3O15379 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HDAC3O15379 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HDAC3O15379 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HDAC3O15379 SNORD56.1-201ENST00000362913 68 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNA5SP125-201ENST00000364843 120 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-128P-201ENST00000383976 107 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-214P-201ENST00000384130 107 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-692P-201ENST00000384496 107 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 AL023284.1-201ENST00000403956 276 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 SNORA11.2-201ENST00000408318 127 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-370P-201ENST00000411008 104 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-325P-201ENST00000411132 105 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RPL37P10-201ENST00000412884 288 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.88□□□□□ -2.11
HDAC3O15379 SNAP23P1-201ENST00000433229 246 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 AC007969.2-201ENST00000441891 191 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 UBE2V1P7-201ENST00000446395 340 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 AC107399.1-201ENST00000451226 265 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.88□□□□□ -2.11
HDAC3O15379 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-559P-201ENST00000516151 98 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 RNU6-1153P-201ENST00000516760 105 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.88□□□□□ -2.11
HDAC3O15379 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.88□□□□□ -2.11
HDAC3O15379 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.88□□□□□ -2.11
HDAC3O15379 CR383656.8-201ENST00000549046 145 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.88□□□□□ -2.11
HDAC3O15379 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.88□□□□□ -2.11
HDAC3O15379 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.88□□□□□ -2.11
HDAC3O15379 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.88□□□□□ -2.11
HDAC3O15379 AL355297.2-201ENST00000604792 129 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 AL133255.1-201ENST00000606374 441 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 MIR6128-201ENST00000615528 109 ntBASIC1.88□□□□□ -2.11
HDAC3O15379 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HDAC3O15379 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.88□□□□□ -2.11
HDAC3O15379 MTND4P23-201ENST00000447723 1363 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RNU6-1159P-201ENST00000362933 107 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RNU6-622P-201ENST00000384272 103 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RNU6-843P-201ENST00000384454 104 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RNU6-748P-201ENST00000384648 107 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RPS29P13-201ENST00000402041 169 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 AC074117.2-201ENST00000417130 397 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 UBE2V1P4-201ENST00000425374 344 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 USP9YP30-201ENST00000430729 455 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 FTH1P25-201ENST00000447665 469 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 Y_RNA.635-201ENST00000459041 101 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 SNORD19B-201ENST00000459623 84 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 ANXA2P1-201ENST00000505539 926 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 AC079140.5-201ENST00000507882 310 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 AK3P2-201ENST00000507976 429 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 PTP4A1P4-201ENST00000512479 322 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 AC026782.1-201ENST00000512952 449 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 SNORA25.11-201ENST00000515935 105 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 RNU6-377P-201ENST00000515965 102 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 AP002770.2-201ENST00000543613 532 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 IMMP1LP2-201ENST00000552954 492 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.87□□□□□ -2.11
HDAC3O15379 AC090897.2-201ENST00000581715 130 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 AC084781.2-201ENST00000615568 161 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.87□□□□□ -2.11
HDAC3O15379 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
HDAC3O15379 AC241585.2-209ENST00000638217 143 ntBASIC1.87□□□□□ -2.11
HDAC3O15379 Y_RNA.40-201ENST00000362645 93 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 RNU6-1317P-201ENST00000364582 104 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 Y_RNA.259-201ENST00000364619 101 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 Y_RNA.387-201ENST00000383918 102 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 Y_RNA.404-201ENST00000383978 102 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 RNU6-601P-201ENST00000384540 107 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.86□□□□□ -2.11
HDAC3O15379 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 EIF1AXP1-201ENST00000419267 435 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 NCOR1P3-201ENST00000420479 303 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.86□□□□□ -2.11
HDAC3O15379 AL139396.1-201ENST00000421137 167 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AF228730.4-201ENST00000421457 183 ntBASIC1.86□□□□□ -2.11
HDAC3O15379 AL356320.1-201ENST00000429616 163 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms