Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RNU6-15P-201ENST00000384534 107 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU6-2-201ENST00000384627 107 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU6-29P-201ENST00000384637 107 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU6-9-201ENST00000384776 107 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU6-33P-201ENST00000384793 107 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU2-29P-201ENST00000410423 189 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS2Q99743 PRPS1P1-201ENST00000445305 876 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AC013470.1-201ENST00000453438 462 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 SNRPFP3-201ENST00000457792 225 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS2Q99743 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS2Q99743 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS2Q99743 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS2Q99743 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AC010900.2-201ENST00000604508 210 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU6-6P-201ENST00000606623 107 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AC002044.1-201ENST00000606707 158 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
NPAS2Q99743 AC022418.1-201ENST00000624118 445 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 AC005609.4-201ENST00000625071 447 ntBASIC1.65□□□□□ -2.15
NPAS2Q99743 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
NPAS2Q99743 RNU4-15P-201ENST00000362613 141 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 Y_RNA.41-201ENST00000362646 102 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 RNU6-23P-201ENST00000363283 107 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 RNU6-780P-201ENST00000391030 104 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 CALM2P3-201ENST00000400429 449 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 SNORD56-201ENST00000413522 71 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 HSPE1P21-201ENST00000438283 308 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.64□□□□□ -2.15
NPAS2Q99743 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.64□□□□□ -2.15
NPAS2Q99743 RN7SKP210-201ENST00000459176 261 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 RNU7-180P-201ENST00000459240 63 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.64□□□□□ -2.15
NPAS2Q99743 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AL163973.1-201ENST00000484753 577 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 CCDC34P1-201ENST00000507441 517 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.64□□□□□ -2.15
NPAS2Q99743 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.64□□□□□ -2.15
NPAS2Q99743 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.64□□□□□ -2.15
NPAS2Q99743 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AC004223.2-201ENST00000590309 544 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AC016727.1-205ENST00000605437 569 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 AC130454.1-201ENST00000622948 401 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 SNORD98-201ENST00000636377 67 ntBASIC1.64□□□□□ -2.15
NPAS2Q99743 MTND4P14-201ENST00000435799 1354 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 Y_RNA.238-201ENST00000364441 102 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 RNU6-434P-201ENST00000384376 107 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 Y_RNA.517-201ENST00000384551 106 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 MTCO3P40-201ENST00000392516 676 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 RNU6-293P-201ENST00000411259 106 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 VN1R36P-201ENST00000414936 291 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 VN1R108P-201ENST00000431580 830 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.63□□□□□ -2.15
NPAS2Q99743 AC112492.4-201ENST00000456549 352 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.63□□□□□ -2.15
NPAS2Q99743 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.63□□□□□ -2.15
NPAS2Q99743 AC145146.1-201ENST00000496370 254 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC107401.1-201ENST00000503426 685 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.63□□□□□ -2.15
NPAS2Q99743 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 SNORA40.12-201ENST00000516329 111 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.63□□□□□ -2.15
NPAS2Q99743 COPS8P3-201ENST00000526024 482 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
NPAS2Q99743 AC087441.2-201ENST00000529141 262 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AL137161.1-201ENST00000532231 390 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 CBX3P4-201ENST00000538909 354 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.63□□□□□ -2.15
NPAS2Q99743 MIR3169-201ENST00000578032 83 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AL356157.2-201ENST00000605122 111 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC017083.3-201ENST00000609955 700 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
NPAS2Q99743 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.63□□□□□ -2.15
NPAS2Q99743 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NPAS2Q99743 Y_RNA.164-201ENST00000363709 102 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RNU6-266P-201ENST00000364225 107 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 Y_RNA.255-201ENST00000364581 97 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RNU6-336P-201ENST00000364891 107 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RNU6-43P-201ENST00000384302 107 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RPS29P13-201ENST00000402041 169 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 AL606923.1-201ENST00000406616 190 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 Y_RNA.595-201ENST00000410403 105 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RN7SKP61-201ENST00000410642 295 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.62□□□□□ -2.15
NPAS2Q99743 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.62□□□□□ -2.15
NPAS2Q99743 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS2Q99743 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS2Q99743 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RNU6-1038P-201ENST00000516516 104 ntBASIC1.62□□□□□ -2.15
NPAS2Q99743 RNA5SP490-201ENST00000517141 136 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 8906.6 ms