Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC3O15379 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
HDAC3O15379 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.93□□□□□ -2.1
HDAC3O15379 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC3O15379 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.93□□□□□ -2.1
HDAC3O15379 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.93□□□□□ -2.1
HDAC3O15379 SNORA31.6-201ENST00000516241 130 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 SCARNA3-201ENST00000517097 143 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
HDAC3O15379 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 MIR4790-201ENST00000577799 79 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 MIR3199-1-201ENST00000582434 88 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC3O15379 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 U4.7-201ENST00000638126 106 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC3O15379 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.92□□□□□ -2.1
HDAC3O15379 RNU6-562P-201ENST00000362731 107 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU4-79P-201ENST00000362764 141 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 Y_RNA.67-201ENST00000362870 100 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU6-336P-201ENST00000364891 107 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU6-1280P-201ENST00000365211 107 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU5E-7P-201ENST00000365290 117 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU6-1329P-201ENST00000365664 107 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC3O15379 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC3O15379 Y_RNA.473-201ENST00000384333 102 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 SNORD116-20-201ENST00000384529 92 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 MT-TD-201ENST00000387419 68 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HDAC3O15379 AL133475.1-201ENST00000404414 305 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU4-53P-201ENST00000410828 140 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.92□□□□□ -2.1
HDAC3O15379 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.92□□□□□ -2.1
HDAC3O15379 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
HDAC3O15379 AC013470.1-201ENST00000453438 462 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 RNU7-187P-201ENST00000458985 68 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AC068781.1-201ENST00000488231 618 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 MTCYBP40-201ENST00000509390 1135 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.92□□□□□ -2.1
HDAC3O15379 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.92□□□□□ -2.1
HDAC3O15379 Y_RNA.675-201ENST00000516389 149 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AC069113.1-201ENST00000517763 267 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AC087854.1-201ENST00000519706 414 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
HDAC3O15379 AC103996.1-201ENST00000555468 102 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AL391813.1-201ENST00000603098 260 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AC016727.1-205ENST00000605437 569 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 AL022345.1-201ENST00000607292 135 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC3O15379 AP006437.1-201ENST00000641440 3685 ntBASIC1.92□□□□□ -2.1
HDAC3O15379 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC3O15379 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC3O15379 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HDAC3O15379 AC073544.1-201ENST00000600110 1595 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 Y_RNA.813-201ENST00000364639 102 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 Y_RNA.394-201ENST00000383942 103 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 RNU6-1013P-201ENST00000384180 107 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 RNU1-148P-201ENST00000384472 162 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 Y_RNA.535-201ENST00000384612 99 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 RNU6-306P-201ENST00000384617 107 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.91□□□□□ -2.1
HDAC3O15379 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 AC003685.2-201ENST00000422795 395 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 PTGES3P4-201ENST00000426243 356 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 TOMM20P4-201ENST00000427861 435 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.91□□□□□ -2.1
HDAC3O15379 AL353689.1-201ENST00000438895 199 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.91□□□□□ -2.1
HDAC3O15379 AP001324.2-201ENST00000461163 319 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 MED28P2-201ENST00000475771 317 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 SNORD19.2-201ENST00000516978 73 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.91□□□□□ -2.1
HDAC3O15379 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.91□□□□□ -2.1
HDAC3O15379 TRAV32-201ENST00000553993 340 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 AC091544.4-201ENST00000555268 342 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
HDAC3O15379 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HDAC3O15379 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HDAC3O15379 RBBP8P1-201ENST00000449447 1844 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 RNU6-858P-201ENST00000362436 107 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 RNU6-105P-201ENST00000363909 104 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 Y_RNA.419-201ENST00000384041 102 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 SNORD116-29-201ENST00000384516 83 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
HDAC3O15379 Y_RNA.632-201ENST00000459189 102 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 AC130509.1-201ENST00000464158 433 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 RNU6-1213P-201ENST00000517075 94 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 SNORA31.23-201ENST00000517219 133 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 AC026371.1-201ENST00000551867 419 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.9□□□□□ -2.11
HDAC3O15379 FRG2DP-202ENST00000566967 323 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.9□□□□□ -2.11
HDAC3O15379 AC069294.1-201ENST00000608397 350 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
HDAC3O15379 AL590808.1-201ENST00000618696 141 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms