Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1252P-201ENST00000363054 104 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-743P-201ENST00000364151 106 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.597-201ENST00000410463 100 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 RN7SKP61-201ENST00000410642 295 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 SRIP3-201ENST00000413200 219 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC027124.2-201ENST00000428249 105 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 snoU13.15-201ENST00000459407 104 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1037P-201ENST00000459571 107 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 HMGB1P35-201ENST00000503360 598 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC091874.1-201ENST00000511402 339 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 SNORA31.16-201ENST00000516773 139 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AP001836.1-201ENST00000604675 523 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AL034555.1-201ENST00000604816 211 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC068944.2-201ENST00000610373 403 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AL359314.1-201ENST00000616913 261 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC068137.4-201ENST00000638485 296 ntBASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
ATG4BQ9Y4P1 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 SNORD32A-201ENST00000364805 84 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-214P-201ENST00000384130 107 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.450-201ENST00000384198 113 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-332P-201ENST00000391193 108 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 SNORD115-47-201ENST00000391226 86 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 MIR450B-201ENST00000401182 78 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 MIR548F1-201ENST00000408667 84 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AL359672.1-201ENST00000442302 409 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 snoU13.26-201ENST00000459452 105 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.665-201ENST00000516177 98 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 HSPE1P18-201ENST00000517602 280 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AL109918.3-201ENST00000603072 338 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 CTHRC1P1-201ENST00000605383 469 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 RMST_3.1-201ENST00000611651 109 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 AC024614.3-201ENST00000637860 256 ntBASIC1.93□□□□□ -2.1
ATG4BQ9Y4P1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNY4P14-201ENST00000363656 96 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1317P-201ENST00000364582 104 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.256-201ENST00000364594 104 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1329P-201ENST00000365664 107 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MIR518A2-201ENST00000384966 87 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RPL23AP95-201ENST00000426806 265 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MTND3P9-201ENST00000429526 346 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 IFNA20P-201ENST00000436840 528 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MTND1P34-201ENST00000438556 671 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 HMGN2P26-201ENST00000463169 339 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AC132942.1-201ENST00000486753 483 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AC145146.1-201ENST00000496370 254 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-718P-201ENST00000516166 105 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-612P-201ENST00000516909 102 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 TRAV32-201ENST00000553993 340 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AC068790.6-201ENST00000602558 258 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 U4.5-201ENST00000617137 123 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MTND4P23-201ENST00000447723 1363 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 MTND4P1-201ENST00000457501 1466 ntBASIC1.92□□□□□ -2.1
ATG4BQ9Y4P1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC009541.1-201ENST00000438279 2662 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 AC092268.1-201ENST00000342691 405 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 RNU4-56P-201ENST00000364700 142 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-877P-201ENST00000383868 107 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.453-201ENST00000384223 109 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 SNORA26.3-201ENST00000391119 136 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 SNORA12-201ENST00000391162 147 ntBASIC1.91□□□□□ -2.1
ATG4BQ9Y4P1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 257.3 ms