Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL669831.3-213ENST00000636676 183 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.5-201ENST00000362334 102 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 RNU6-1115P-201ENST00000362490 106 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.112-201ENST00000363250 102 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 SNORA38-201ENST00000363946 132 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 SNORA33.2-201ENST00000365413 134 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.404-201ENST00000383978 102 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 U3.37-201ENST00000408528 213 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 RNA5SP508-201ENST00000411327 119 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AL627311.1-201ENST00000431514 115 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 MTND4P19-201ENST00000446659 478 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 NDUFB1P2-201ENST00000449477 176 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.653-201ENST00000459091 95 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 RNU7-138P-201ENST00000459479 64 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC011005.2-201ENST00000487324 359 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC018437.1-201ENST00000492214 406 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC107222.1-201ENST00000510899 637 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.670-201ENST00000516255 105 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 RNU6-327P-201ENST00000516270 127 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AP002770.2-201ENST00000543613 532 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 MIR5690-201ENST00000583739 73 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC018462.2-201ENST00000605375 395 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 RNU6-91P-201ENST00000607774 107 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC010378.1-201ENST00000619270 362 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC024581.2-201ENST00000619986 252 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 AC131280.1-202ENST00000624067 4211 ntBASIC2.59□□□□□ -1.99
DDX43Q9NXZ2 Z75746.1-201ENST00000440243 2080 ntBASIC2.59□□□□□ -2
DDX43Q9NXZ2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -2
DDX43Q9NXZ2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX43Q9NXZ2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 Y_RNA.146-201ENST00000363549 102 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 RNU6-1329P-201ENST00000365664 107 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 SNORA22B-201ENST00000383876 138 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 Y_RNA.473-201ENST00000384333 102 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 MIR606-201ENST00000384851 96 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 FTH1P15-201ENST00000406984 280 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC097463.2-201ENST00000421074 142 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 OOSP1P1-201ENST00000423265 274 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 SNORD5.1-201ENST00000458800 75 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 RNU7-187P-201ENST00000458985 68 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC133134.1-201ENST00000466800 359 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC097473.1-201ENST00000508142 408 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC026371.1-201ENST00000551867 419 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 SNRPGP18-201ENST00000553000 214 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 CYP2C61P-201ENST00000604072 290 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AP001836.1-201ENST00000604675 523 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC123912.5-201ENST00000605470 343 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AL162730.1-201ENST00000605734 292 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC011890.2-201ENST00000613393 294 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC040896.1-201ENST00000613819 479 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 MIR6128-201ENST00000615528 109 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
DDX43Q9NXZ2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDX43Q9NXZ2 AC069528.2-201ENST00000624849 1991 ntBASIC2.58□□□□□ -2
DDX43Q9NXZ2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 MTND5P10-201ENST00000603719 1809 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 Y_RNA.324-201ENST00000365165 102 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 Y_RNA.445-201ENST00000384168 102 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 RNU6-1160P-201ENST00000384546 104 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 SNORD73A-201ENST00000386062 65 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 RNU6-308P-201ENST00000390957 107 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 Y_RNA.594-201ENST00000410373 140 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC018865.2-201ENST00000423631 129 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AL645568.3-201ENST00000433683 316 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 RPL30P15-201ENST00000457129 321 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 MRPL42P6-201ENST00000486397 371 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC096745.1-201ENST00000509945 370 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC008413.1-201ENST00000511864 177 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 SMURF2P1-201ENST00000514992 481 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 RNU6-1045P-201ENST00000516321 107 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 RNU5B-3P-201ENST00000516601 115 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
DDX43Q9NXZ2 AC079598.5-201ENST00000547460 117 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms