Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC068647.1-201ENST00000489539 2265 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX6-1P78426 MTND5P16-201ENST00000460269 1703 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX6-1P78426 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX6-1P78426 RNU6-874P-201ENST00000362390 105 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 Y_RNA.145-201ENST00000363527 102 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 RNU5F-3P-201ENST00000363767 117 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 AP002088.1-201ENST00000382740 395 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 U8.10-201ENST00000384260 133 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 Y_RNA.510-201ENST00000384511 114 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 MIR218-1-201ENST00000384999 110 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 snosnR66.1-201ENST00000391095 99 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 MIR320B2-201ENST00000408479 138 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 RNA5SP293-201ENST00000410527 113 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.98□□□□□ -1.93
NKX6-1P78426 BX679664.1-201ENST00000434429 253 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX6-1P78426 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.98□□□□□ -1.93
NKX6-1P78426 RNU6-1045P-201ENST00000516321 107 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.98□□□□□ -1.93
NKX6-1P78426 AC005520.5-201ENST00000613926 164 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX6-1P78426 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX6-1P78426 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX6-1P78426 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
NKX6-1P78426 AC091812.1-201ENST00000432235 1948 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NKX6-1P78426 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NKX6-1P78426 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX6-1P78426 snoU2_19.1-201ENST00000362361 80 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 SNORD14.1-201ENST00000365609 90 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 Y_RNA.389-201ENST00000383924 113 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 Y_RNA.485-201ENST00000384395 102 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 RNU6-738P-201ENST00000384531 106 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 MIR29B2-201ENST00000385055 81 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 RNU6-101P-201ENST00000410323 104 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 RPL30P4-201ENST00000429309 333 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX6-1P78426 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX6-1P78426 RPL23AP70-201ENST00000483361 460 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 RN7SL504P-201ENST00000494496 287 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC145146.1-201ENST00000496370 254 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX6-1P78426 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 IGKV2-26-201ENST00000518305 343 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 EIF4BP1-201ENST00000554881 351 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX6-1P78426 RPS29P30-201ENST00000600975 111 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC005034.5-201ENST00000604219 466 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 SNORD58B-201ENST00000607313 66 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC069294.1-201ENST00000608397 350 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC022149.2-201ENST00000621061 203 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC006386.2-201ENST00000624491 75 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC012005.1-201ENST00000624575 75 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC138305.3-201ENST00000624988 240 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 AC090517.3-201ENST00000625170 141 ntBASIC2.97□□□□□ -1.93
NKX6-1P78426 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX6-1P78426 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX6-1P78426 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NKX6-1P78426 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX6-1P78426 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NKX6-1P78426 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NKX6-1P78426 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX6-1P78426 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX6-1P78426 RNU4-15P-201ENST00000362613 141 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 RNA5SP374-201ENST00000362939 125 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 U3.9-201ENST00000363823 204 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 SNORA63C-201ENST00000364578 129 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 RNU6-1328P-201ENST00000410938 106 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 HMGB3P2-201ENST00000411913 584 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AC126124.2-201ENST00000413542 321 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AL513477.1-202ENST00000417061 214 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 MTND2P23-201ENST00000422990 651 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX6-1P78426 AP000705.1-201ENST00000454567 350 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AC112492.4-201ENST00000456549 352 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AC146507.2-201ENST00000460608 476 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AP000870.1-201ENST00000472927 406 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 RNU6-58P-201ENST00000517143 103 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 MIR4680-201ENST00000580906 66 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 MIR5188-201ENST00000583467 113 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 AL162373.1-201ENST00000620433 407 ntBASIC2.96□□□□□ -1.94
NKX6-1P78426 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.96□□□□□ -1.94
NKX6-1P78426 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
NKX6-1P78426 ZNF72P-201ENST00000425869 1908 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 AC138915.1-201ENST00000565427 1685 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NKX6-1P78426 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX6-1P78426 SNORD115-8-201ENST00000363856 82 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 RNU6-280P-201ENST00000364145 104 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 SNORD115-38-201ENST00000365037 82 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 Y_RNA.557-201ENST00000384680 107 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 RNU6-985P-201ENST00000410182 104 ntBASIC2.95□□□□□ -1.94
NKX6-1P78426 AL357552.1-201ENST00000445254 415 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms