Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.96□□□□□ -2.1
HDAC3O15379 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.96□□□□□ -2.1
HDAC3O15379 MIR3941-201ENST00000582572 103 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AC243960.4-201ENST00000600532 288 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.96□□□□□ -2.1
HDAC3O15379 AC091152.3-201ENST00000604227 325 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 ELOCP5-201ENST00000604924 333 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AC087045.1-201ENST00000605856 382 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 uc_338.5-201ENST00000611839 155 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AL138726.1-201ENST00000614873 333 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 uc_338.15-201ENST00000615470 191 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 U4atac.1-201ENST00000618345 95 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AC022140.2-201ENST00000623500 188 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.96□□□□□ -2.1
HDAC3O15379 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
HDAC3O15379 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.96□□□□□ -2.1
HDAC3O15379 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HDAC3O15379 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
HDAC3O15379 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 RNU6-428P-201ENST00000362942 107 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC096649.2-201ENST00000416186 393 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AL117339.3-201ENST00000418733 162 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 RPS3AP52-201ENST00000435639 297 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AL161651.1-201ENST00000440882 223 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.95□□□□□ -2.1
HDAC3O15379 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.95□□□□□ -2.1
HDAC3O15379 RNU7-138P-201ENST00000459479 64 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.95□□□□□ -2.1
HDAC3O15379 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC116655.1-201ENST00000508324 901 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 FGF7P4-201ENST00000509595 295 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC092436.3-201ENST00000511788 257 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 RPL39P5-202ENST00000512505 151 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.95□□□□□ -2.1
HDAC3O15379 RNU6-566P-201ENST00000516790 107 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.95□□□□□ -2.1
HDAC3O15379 AC104576.1-201ENST00000524225 88 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.95□□□□□ -2.1
HDAC3O15379 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.95□□□□□ -2.1
HDAC3O15379 MIR4435-1-201ENST00000582552 80 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 MIR4795-201ENST00000584182 89 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 POLR3GP2-201ENST00000588366 668 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC023043.2-201ENST00000589678 1026 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC008121.1-201ENST00000603244 268 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC064836.2-201ENST00000609491 462 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 AC099654.5-201ENST00000636479 350 ntBASIC1.95□□□□□ -2.1
HDAC3O15379 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.95□□□□□ -2.1
HDAC3O15379 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
HDAC3O15379 AC010889.1-201ENST00000566193 2666 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 RNU6-694P-201ENST00000364071 147 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 SNORD116-11-201ENST00000383882 92 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 RNU6-750P-201ENST00000390946 107 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 MIR548K-201ENST00000408406 116 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 RNU6-1304P-201ENST00000411374 106 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.94□□□□□ -2.1
HDAC3O15379 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.94□□□□□ -2.1
HDAC3O15379 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.94□□□□□ -2.1
HDAC3O15379 MTND4LP16-201ENST00000440828 295 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
HDAC3O15379 AL031274.1-201ENST00000450334 232 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.94□□□□□ -2.1
HDAC3O15379 MTND5P5-201ENST00000503764 376 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AC008526.1-201ENST00000509149 338 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.94□□□□□ -2.1
HDAC3O15379 SNORA43.2-201ENST00000516652 128 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 ACA59.2-201ENST00000517061 156 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 RNA5SP454-201ENST00000517231 127 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AP004607.1-201ENST00000524456 203 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 NACAP3-201ENST00000552100 481 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AC005668.1-201ENST00000571142 476 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AL355375.2-201ENST00000574825 175 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.94□□□□□ -2.1
HDAC3O15379 AC097372.5-201ENST00000623665 376 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AL359757.2-201ENST00000624309 274 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 SCARNA4-202ENST00000625402 129 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 MIR3199-2-201ENST00000636243 86 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 MIR1302-1-201ENST00000637932 143 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 MTND4P29-201ENST00000503122 1372 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 AC006026.1-201ENST00000444025 1803 ntBASIC1.94□□□□□ -2.1
HDAC3O15379 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC3O15379 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HDAC3O15379 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HDAC3O15379 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNA5SP126-201ENST00000365092 109 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNU6-827P-201ENST00000365553 106 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNU6-95P-201ENST00000384697 107 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNU6-1140P-201ENST00000410517 106 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNU6-1328P-201ENST00000410938 106 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 RNA5SP508-201ENST00000411327 119 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 AL359672.1-201ENST00000442302 409 ntBASIC1.93□□□□□ -2.1
HDAC3O15379 MTND1P17-201ENST00000448961 204 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms