Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uspl1Q3ULM6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Gm17971-201ENSMUST00000190239 806 ntBASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Gm7506-201ENSMUST00000207758 815 ntBASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uspl1Q3ULM6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Uspl1Q3ULM6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Uspl1Q3ULM6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
Uspl1Q3ULM6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uspl1Q3ULM6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Gm6257-201ENSMUST00000163864 910 ntBASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Gm9172-201ENSMUST00000212092 954 ntBASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.75■□□□□ 0.91
Uspl1Q3ULM6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Gm12644-201ENSMUST00000119935 606 ntBASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Dancr-204ENSMUST00000132389 2347 ntBASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 424.7 ms