Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm29707-201ENSMUST00000196325 491 ntBASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1aP25118 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1aP25118 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Gm13836-201ENSMUST00000121159 501 ntBASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1aP25118 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Gm15565-201ENSMUST00000118890 427 ntBASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1aP25118 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tnfrsf1aP25118 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms