Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX6-1P78426 AC010620.2-201ENST00000600135 313 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AL078605.1-201ENST00000603529 500 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AC087588.2-201ENST00000617667 426 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 AC026241.1-201ENST00000517873 2142 ntBASIC3.02□□□□□ -1.93
NKX6-1P78426 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
NKX6-1P78426 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX6-1P78426 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX6-1P78426 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX6-1P78426 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX6-1P78426 RNU1-75P-201ENST00000347264 129 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 Y_RNA.106-201ENST00000363189 100 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 Y_RNA.424-201ENST00000384063 103 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
NKX6-1P78426 RPS26P42-201ENST00000413485 326 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.01□□□□□ -1.93
NKX6-1P78426 MTCO3P19-201ENST00000415864 321 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX6-1P78426 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX6-1P78426 RPS3P1-201ENST00000456781 192 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 snoU13.6-201ENST00000458785 104 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AC073901.1-201ENST00000462471 408 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AC010401.1-201ENST00000463867 348 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 ANXA2P1-201ENST00000505539 926 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 RNU6-911P-201ENST00000516523 104 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 MIR2355-201ENST00000517199 87 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX6-1P78426 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX6-1P78426 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX6-1P78426 LARP7P3-201ENST00000579888 337 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 RPL30P11-203ENST00000598995 310 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AL162713.1-201ENST00000604480 262 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AL162274.2-201ENST00000614406 332 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 MIR7112-201ENST00000616126 65 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 AL132822.1-201ENST00000617063 513 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 U2.1-201ENST00000618978 145 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX6-1P78426 MIR4272-201ENST00000635924 64 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX6-1P78426 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX6-1P78426 MTND4P1-201ENST00000457501 1466 ntBASIC3.01□□□□□ -1.93
NKX6-1P78426 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX6-1P78426 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX6-1P78426 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3□□□□□ -1.93
NKX6-1P78426 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NKX6-1P78426 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3□□□□□ -1.93
NKX6-1P78426 RNU6-137P-201ENST00000363680 108 ntBASIC3□□□□□ -1.93
NKX6-1P78426 Y_RNA.358-201ENST00000365491 99 ntBASIC3□□□□□ -1.93
NKX6-1P78426 SNORD17-201ENST00000390930 237 ntBASIC3□□□□□ -1.93
NKX6-1P78426 MIR208B-201ENST00000401172 77 ntBASIC3□□□□□ -1.93
NKX6-1P78426 Y_RNA.592-201ENST00000410274 109 ntBASIC3□□□□□ -1.93
NKX6-1P78426 AC096644.2-201ENST00000429278 159 ntBASIC3□□□□□ -1.93
NKX6-1P78426 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3□□□□□ -1.93
NKX6-1P78426 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
NKX6-1P78426 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3□□□□□ -1.93
NKX6-1P78426 AL353752.1-201ENST00000454946 260 ntBASIC3□□□□□ -1.93
NKX6-1P78426 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3□□□□□ -1.93
NKX6-1P78426 RNU6-327P-201ENST00000516270 127 ntBASIC3□□□□□ -1.93
NKX6-1P78426 SNORA40.14-201ENST00000516543 86 ntBASIC3□□□□□ -1.93
NKX6-1P78426 SCARNA3-201ENST00000517097 143 ntBASIC3□□□□□ -1.93
NKX6-1P78426 Y_RNA.721-201ENST00000517207 102 ntBASIC3□□□□□ -1.93
NKX6-1P78426 COX6CP5-201ENST00000527162 228 ntBASIC3□□□□□ -1.93
NKX6-1P78426 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3□□□□□ -1.93
NKX6-1P78426 AC006600.1-201ENST00000572529 153 ntBASIC3□□□□□ -1.93
NKX6-1P78426 MIR4325-201ENST00000583049 90 ntBASIC3□□□□□ -1.93
NKX6-1P78426 AC016727.2-201ENST00000603988 621 ntBASIC3□□□□□ -1.93
NKX6-1P78426 AL360085.1-201ENST00000604713 532 ntBASIC3□□□□□ -1.93
NKX6-1P78426 SNORA50A-202ENST00000629536 136 ntBASIC3□□□□□ -1.93
NKX6-1P78426 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
NKX6-1P78426 AL356274.2-201ENST00000624379 3752 ntBASIC3□□□□□ -1.93
NKX6-1P78426 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NKX6-1P78426 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX6-1P78426 AC093010.3-201ENST00000570269 15214 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 RNY3P11-201ENST00000364153 102 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 Y_RNA.319-201ENST00000365138 92 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 Y_RNA.526-201ENST00000384572 110 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NKX6-1P78426 RNU6-1093P-201ENST00000391194 107 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 U6atac.2-201ENST00000408644 118 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 COTL1P1-201ENST00000422309 375 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 USP9YP16-201ENST00000430287 407 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX6-1P78426 RPS12P18-201ENST00000442381 270 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX6-1P78426 USP9YP23-201ENST00000455085 407 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
NKX6-1P78426 AC140059.1-201ENST00000489238 361 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX6-1P78426 RNA5SP54-201ENST00000516951 92 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.99□□□□□ -1.93
NKX6-1P78426 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX6-1P78426 AC026333.2-201ENST00000542164 106 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX6-1P78426 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX6-1P78426 AC090617.3-201ENST00000573670 475 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 MIR5680-201ENST00000577577 84 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 MIR3199-1-201ENST00000582434 88 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.99□□□□□ -1.93
NKX6-1P78426 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms