Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNORD116-28-201ENST00000516123 91 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.5□□□□□ -1.85
NPHS1O60500 CBX3P4-201ENST00000538909 354 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.5□□□□□ -1.85
NPHS1O60500 PARP1P2-201ENST00000556806 195 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AC087499.8-201ENST00000578406 226 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AC005176.2-201ENST00000596933 147 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AL162424.1-201ENST00000602325 221 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 MZT1P2-201ENST00000604387 248 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 MIR8058-201ENST00000615737 89 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AC002543.1-201ENST00000299783 1954 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NPHS1O60500 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHS1O60500 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHS1O60500 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHS1O60500 AC091152.2-201ENST00000591628 2569 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHS1O60500 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPHS1O60500 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHS1O60500 SNORA25.1-201ENST00000362326 128 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 Y_RNA.331-201ENST00000365267 102 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 Y_RNA.418-201ENST00000384029 102 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AL390729.2-201ENST00000416137 156 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHS1O60500 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHS1O60500 MRPS10P1-201ENST00000448483 130 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AL133162.1-201ENST00000463228 453 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AC007215.1-201ENST00000464893 276 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 RN7SL385P-201ENST00000468873 276 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 RPL7P47-201ENST00000497299 556 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AIG1P1-201ENST00000503376 148 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AC110768.1-201ENST00000509222 400 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 RNU5F-2P-201ENST00000516066 82 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 Y_RNA.683-201ENST00000516508 93 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 SNORD19.2-201ENST00000516978 73 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AC024405.2-202ENST00000532731 184 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AL137100.2-201ENST00000555786 315 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 AC006001.4-201ENST00000622243 395 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 MTND5P35-201ENST00000557537 1720 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHS1O60500 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHS1O60500 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPHS1O60500 MFSD8-233ENST00000641482 4860 ntBASIC3.49□□□□□ -1.85
NPHS1O60500 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPHS1O60500 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPHS1O60500 SPRR2C-201ENST00000290702 219 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 MIR372-201ENST00000362225 67 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 Y_RNA.122-201ENST00000363331 96 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 RNU6-529P-201ENST00000363383 104 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 Y_RNA.179-201ENST00000363844 90 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 MIR30B-201ENST00000384850 88 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NPHS1O60500 U3.26-201ENST00000391236 204 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 PCNPP3-201ENST00000393579 471 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHS1O60500 MIR208B-201ENST00000401172 77 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 RNA5SP38-201ENST00000410750 119 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 Y_RNA.626-201ENST00000411288 95 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 RPL19P1-201ENST00000411635 428 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC245291.1-201ENST00000419501 328 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AL159169.1-201ENST00000421119 127 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHS1O60500 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHS1O60500 MTCO1P5-201ENST00000433573 344 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC021205.2-201ENST00000480069 347 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC091959.1-201ENST00000495857 238 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHS1O60500 RNU6-966P-201ENST00000516479 104 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.48□□□□□ -1.85
NPHS1O60500 CYP4A27P-201ENST00000567218 190 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC105137.2-201ENST00000569073 466 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 MIR3136-201ENST00000583498 78 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AL137843.1-201ENST00000605078 385 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHS1O60500 MIR6798-201ENST00000612887 67 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 AL354798.1-201ENST00000622505 329 ntBASIC3.48□□□□□ -1.85
NPHS1O60500 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.48□□□□□ -1.85
NPHS1O60500 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPHS1O60500 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPHS1O60500 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHS1O60500 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHS1O60500 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPHS1O60500 MIR410-201ENST00000362222 80 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 Y_RNA.40-201ENST00000362645 93 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 Y_RNA.275-201ENST00000364726 110 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 RNY4P28-201ENST00000365281 93 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 RNU6-514P-201ENST00000384208 107 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 RNU6-748P-201ENST00000384648 107 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHS1O60500 POLR2KP2-201ENST00000438155 177 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 AC104332.1-201ENST00000440471 797 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 UQCRBP2-201ENST00000447827 297 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 RPS4XP2-201ENST00000458402 793 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 RNU6-625P-201ENST00000459412 107 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 AC107393.1-201ENST00000512403 346 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms