Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RPS26P2-201ENST00000440331 348 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 AL162151.2-201ENST00000448875 158 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 RN7SL132P-201ENST00000478131 296 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 SNORA67.7-201ENST00000516664 135 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 RNU6-126P-201ENST00000516685 103 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 MTND6P33-201ENST00000571794 183 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 AL160290.3-201ENST00000604869 165 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 uc_338.4-201ENST00000616635 176 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 AL592182.3-201ENST00000642132 3304 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 ASNSP1-201ENST00000518311 1939 ntBASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC61Q9Y6R9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 Y_RNA.124-201ENST00000363339 93 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 U8.12-201ENST00000384701 133 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 OR2AH1P-201ENST00000425717 928 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AC083906.5-201ENST00000503722 328 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AC091826.1-201ENST00000514065 313 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AP004371.1-201ENST00000525240 214 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AL161713.1-201ENST00000555538 145 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 RPL23AP97-201ENST00000568955 471 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 MIR4429-201ENST00000580105 73 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 MIR4286-201ENST00000580651 93 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 MIR92B-201ENST00000607575 96 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 PCGEM1.1-201ENST00000613431 131 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AC006133.1-201ENST00000617106 264 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 AC007546.2-201ENST00000623996 360 ntBASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC61Q9Y6R9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CCDC61Q9Y6R9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC61Q9Y6R9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC61Q9Y6R9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 Y_RNA.111-201ENST00000363248 100 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 Y_RNA.198-201ENST00000364013 98 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 AL359837.1-201ENST00000381357 287 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 RNA5SP246-201ENST00000458909 119 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 AC078817.1-201ENST00000492623 435 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 RNA5SP236-201ENST00000516169 116 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 SNORA70.16-201ENST00000516390 95 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 AL034555.1-201ENST00000604816 211 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 MIR6875-201ENST00000617506 72 ntBASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC61Q9Y6R9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 SNORA63D-201ENST00000364359 132 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 RNU6-497P-201ENST00000365316 104 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 MIR325-201ENST00000385260 98 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 RPL21P65-201ENST00000406094 466 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 AL591419.1-201ENST00000427423 339 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 RN7SL542P-201ENST00000467147 294 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 AC108145.1-201ENST00000503770 153 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 RNU4-60P-201ENST00000517239 135 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 EIF4A1P12-201ENST00000551910 141 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 RN7SL703P-201ENST00000578485 302 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 MIR3158-1-201ENST00000583596 81 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 Z95331.1-201ENST00000623075 23112 ntBASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CCDC61Q9Y6R9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 MIR759-201ENST00000390224 91 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 RN7SKP202-201ENST00000410439 330 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 SNORD116-26-201ENST00000516006 96 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 AC019288.1-201ENST00000557918 224 ntBASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC61Q9Y6R9 MIR4444-1-201ENST00000581696 74 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms