Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-199P-201ENST00000362954 107 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 Y_RNA.310-201ENST00000365063 113 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 SNORA18.2-201ENST00000383865 132 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 Y_RNA.420-201ENST00000384043 110 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-44P-201ENST00000384045 107 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 U8.12-201ENST00000384701 133 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 MIR3065-201ENST00000390137 79 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 HMGN2P20-201ENST00000437531 273 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AL441985.1-201ENST00000457727 251 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 S100A11P1-201ENST00000477525 312 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 RNU1-61P-201ENST00000516107 151 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AC112693.2-201ENST00000556538 232 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AC012493.2-201ENST00000595083 291 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AC079587.1-201ENST00000603846 277 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AL137843.1-201ENST00000605078 385 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AL391261.4-201ENST00000616012 481 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AC006133.1-201ENST00000617106 264 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP196-201ENST00000625967 102 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 MIR492-201ENST00000638676 116 ntBASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 AC087190.4-201ENST00000574616 8334 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 MIR383-201ENST00000362257 73 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 MIR331-201ENST00000362302 94 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 Y_RNA.341-201ENST00000365341 102 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-969P-201ENST00000383900 105 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 SNORA67.2-201ENST00000384300 149 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 RNU1-13P-201ENST00000384499 162 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 Y_RNA.542-201ENST00000384641 111 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 RNU7-197P-201ENST00000458836 62 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-1211P-201ENST00000459179 105 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-1234P-201ENST00000516877 103 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 TRAV8-5-201ENST00000537369 341 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AC090877.1-201ENST00000561418 344 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AC006130.2-201ENST00000586202 326 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 FAM27D1-201ENST00000612308 341 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AC140113.4-201ENST00000622087 222 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AC007546.2-201ENST00000623996 360 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AC112484.5-201ENST00000624189 228 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 U6.115-201ENST00000636045 103 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB9Q9Y5E1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 SCN1A-220ENST00000641603 12506 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 LINC01355-201ENST00000566551 5444 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP307-201ENST00000362863 116 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 SNORD114-19-201ENST00000363072 75 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNU1-44P-201ENST00000384453 163 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP317-201ENST00000410176 116 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP311-201ENST00000411290 116 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AL365496.1-201ENST00000426885 215 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AL714022.1-201ENST00000439897 151 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 Z75741.1-201ENST00000446793 314 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RPS3P1-201ENST00000456781 192 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 HMGN2P16-201ENST00000456802 261 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNU7-141P-201ENST00000459304 62 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RN7SL812P-201ENST00000493791 279 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AC145146.1-201ENST00000496370 254 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP315-201ENST00000516340 116 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP312-201ENST00000517068 116 ntBASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB9Q9Y5E1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-1205P-201ENST00000363625 106 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 U3.8-201ENST00000363675 217 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-80P-201ENST00000384195 107 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP171-201ENST00000391071 115 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 AC006461.1-201ENST00000412637 326 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 AC245047.8-201ENST00000456455 284 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP154-201ENST00000516193 111 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNU2-58P-201ENST00000516403 183 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNU2-44P-201ENST00000516795 194 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 RNU1-45P-201ENST00000517191 141 ntBASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB9Q9Y5E1 AC025281.1-201ENST00000567026 265 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 738 ms