Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MIR518D-201ENST00000385014 87 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AL590004.1-201ENST00000405321 300 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 RPS4XP7-201ENST00000406274 780 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 RNU6-1304P-201ENST00000411374 106 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 RPL37P10-201ENST00000412884 288 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 Z82205.1-201ENST00000428456 297 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AP001324.2-201ENST00000461163 319 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AC027575.1-201ENST00000481064 460 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AC079140.5-201ENST00000507882 310 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 CYCSP27-201ENST00000527643 293 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 MIR3941-201ENST00000582572 103 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AC013412.1-201ENST00000610687 192 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 PART1_1.1-201ENST00000611761 217 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 AL449363.1-201ENST00000617815 186 ntBASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
DDX43Q9NXZ2 MIR369-201ENST00000362155 70 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.128-201ENST00000363391 112 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.216-201ENST00000364205 93 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 MTCYBP4-201ENST00000401524 249 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 MIR548P-201ENST00000408336 84 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RNU2-3P-201ENST00000410144 191 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RNU6-370P-201ENST00000411008 104 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 CYCSP33-201ENST00000414485 327 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 MTCO2P27-201ENST00000420740 428 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AL590632.1-201ENST00000424289 371 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 Z98742.2-201ENST00000431564 187 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AC073901.1-201ENST00000462471 408 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RPL23AP45-201ENST00000476406 468 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AC022493.1-201ENST00000492984 337 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 MTND3P25-201ENST00000509243 135 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 RNA5SP112-201ENST00000515937 99 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 ACA59.2-201ENST00000517061 156 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 LRRC37A5P-203ENST00000580181 585 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 MIR3124-201ENST00000582636 67 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 MIR3171-201ENST00000584270 74 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AC078795.3-201ENST00000602913 472 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AL645944.1-201ENST00000603857 493 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AL049779.4-201ENST00000604500 156 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AC002044.1-201ENST00000606707 158 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 AC090971.5-201ENST00000621102 293 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 CTSLP2-204ENST00000629029 392 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 FO624990.1-201ENST00000636373 85 ntBASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
DDX43Q9NXZ2 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC080100.1-201ENST00000624239 5356 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 RNU6-486P-201ENST00000363116 107 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.162-201ENST00000363683 102 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 RNA5SP456-201ENST00000364002 114 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 RNU6-266P-201ENST00000364225 107 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.482-201ENST00000384377 111 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 SNORA67.4-201ENST00000384688 142 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 RNU6-607P-201ENST00000411283 108 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 RPL21P90-201ENST00000415692 466 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC004383.1-201ENST00000438135 289 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 ELOCP24-201ENST00000456370 334 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC080013.2-201ENST00000460866 323 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.711-201ENST00000516993 102 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AC010186.2-204ENST00000537668 439 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AL133215.3-201ENST00000609801 448 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.64□□□□□ -1.99
DDX43Q9NXZ2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms