Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.64-201ENST00000362845 102 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 Y_RNA.105-201ENST00000363182 111 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 Y_RNA.123-201ENST00000363338 102 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 Y_RNA.152-201ENST00000363578 100 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 RNU6-898P-201ENST00000365627 104 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 SNORA51.11-201ENST00000384442 131 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 RNU6-1026P-201ENST00000384465 108 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 RNU6-658P-201ENST00000384606 106 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 MIR591-201ENST00000385290 95 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 U3.37-201ENST00000408528 213 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 AC007098.1-201ENST00000420122 367 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT40Q6A162 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT40Q6A162 AC104564.1-201ENST00000493028 407 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 RNU6-397P-201ENST00000516226 104 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 RNU6-911P-201ENST00000516523 104 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 SNORA43.2-201ENST00000516652 128 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 SNORA31.18-201ENST00000517043 134 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 AC093331.1-201ENST00000521474 169 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT40Q6A162 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT40Q6A162 AC060766.3-201ENST00000591442 263 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 MTND4LP5-201ENST00000605152 292 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT40Q6A162 AL159153.1-201ENST00000619688 317 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 AC097372.5-201ENST00000623665 376 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 SNORA50A-202ENST00000629536 136 ntBASIC3.5□□□□□ -1.85
KRT40Q6A162 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRT40Q6A162 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT40Q6A162 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT40Q6A162 Y_RNA.476-201ENST00000384347 108 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 Y_RNA.483-201ENST00000384380 101 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 SNORA69.1-201ENST00000390904 137 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 RNU6-700P-201ENST00000391043 107 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 MTATP6P7-201ENST00000453315 681 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT40Q6A162 AC091826.1-201ENST00000514065 313 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 RNA5SP468-201ENST00000516782 93 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 RNU6-897P-201ENST00000517135 105 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT40Q6A162 AL590705.4-201ENST00000532209 134 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 AMZ2P1-203ENST00000565833 850 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT40Q6A162 AL110115.1-201ENST00000614396 364 ntBASIC3.49□□□□□ -1.85
KRT40Q6A162 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
KRT40Q6A162 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.49□□□□□ -1.85
KRT40Q6A162 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT40Q6A162 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT40Q6A162 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT40Q6A162 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT40Q6A162 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT40Q6A162 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRT40Q6A162 AL136360.1-201ENST00000503377 1900 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
KRT40Q6A162 MIR22-201ENST00000362190 85 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 RNU6-270P-201ENST00000364131 105 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 RNU1-73P-201ENST00000383971 164 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 Y_RNA.461-201ENST00000384263 103 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 SNORA12.2-201ENST00000391040 156 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 RNA5SP274-201ENST00000410484 108 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 ARL5AP4-201ENST00000430731 512 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT40Q6A162 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT40Q6A162 MTND1P19-201ENST00000511780 315 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 RN7SKP43-201ENST00000516173 320 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 IGHV3-76-201ENST00000522465 295 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT40Q6A162 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT40Q6A162 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.48□□□□□ -1.85
KRT40Q6A162 MIR3162-201ENST00000581818 82 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.48□□□□□ -1.85
KRT40Q6A162 AC078899.3-201ENST00000599065 212 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 AC024153.1-201ENST00000603103 365 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 IGHVIII-44-202ENST00000636235 289 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 AC241585.2-209ENST00000638217 143 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRT40Q6A162 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
KRT40Q6A162 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.47□□□□□ -1.85
KRT40Q6A162 RNU6-884P-201ENST00000363889 107 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 RNU4-50P-201ENST00000364361 141 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 Y_RNA.376-201ENST00000365638 108 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 Y_RNA.405-201ENST00000383979 100 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 Y_RNA.451-201ENST00000384200 100 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 Y_RNA.524-201ENST00000384564 100 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 Y_RNA.561-201ENST00000384694 100 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRT40Q6A162 AP000567.1-201ENST00000406413 156 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 RNU6-121P-201ENST00000410525 99 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 RN7SKP220-201ENST00000410611 288 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 RNU2-71P-201ENST00000411395 189 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 AP000275.1-201ENST00000411943 390 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 Z82188.1-201ENST00000436709 154 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRT40Q6A162 RPEP5-201ENST00000441137 268 ntBASIC3.47□□□□□ -1.85
KRT40Q6A162 U8.22-201ENST00000459141 133 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms