Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.51□□□□□ -1.85
KLF4O43474 AC010095.1-201ENST00000443543 144 ntBASIC3.51□□□□□ -1.85
KLF4O43474 RNA5SP179-201ENST00000517284 121 ntBASIC3.51□□□□□ -1.85
KLF4O43474 MYL12BP1-201ENST00000569826 507 ntBASIC3.51□□□□□ -1.85
KLF4O43474 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
KLF4O43474 MIR4444-1-201ENST00000581696 74 ntBASIC3.51□□□□□ -1.85
KLF4O43474 MIR4444-2-201ENST00000584390 74 ntBASIC3.51□□□□□ -1.85
KLF4O43474 AL354798.1-201ENST00000622505 329 ntBASIC3.51□□□□□ -1.85
KLF4O43474 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.51□□□□□ -1.85
KLF4O43474 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KLF4O43474 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KLF4O43474 AL079305.1-201ENST00000623159 3008 ntBASIC3.51□□□□□ -1.85
KLF4O43474 LINC02555-201ENST00000563933 1951 ntBASIC3.51□□□□□ -1.85
KLF4O43474 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.5□□□□□ -1.85
KLF4O43474 MTND5P35-201ENST00000557537 1720 ntBASIC3.5□□□□□ -1.85
KLF4O43474 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KLF4O43474 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KLF4O43474 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 SNORA62.3-201ENST00000365110 153 ntBASIC3.5□□□□□ -1.85
KLF4O43474 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 RNA5SP171-201ENST00000391071 115 ntBASIC3.5□□□□□ -1.85
KLF4O43474 PTMAP2-201ENST00000397627 327 ntBASIC3.5□□□□□ -1.85
KLF4O43474 RPL30P4-201ENST00000429309 333 ntBASIC3.5□□□□□ -1.85
KLF4O43474 AC007395.1-201ENST00000451333 677 ntBASIC3.5□□□□□ -1.85
KLF4O43474 CYP2C59P-201ENST00000457790 269 ntBASIC3.5□□□□□ -1.85
KLF4O43474 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.5□□□□□ -1.85
KLF4O43474 AC074133.1-201ENST00000515696 183 ntBASIC3.5□□□□□ -1.85
KLF4O43474 RNU6-586P-201ENST00000517265 104 ntBASIC3.5□□□□□ -1.85
KLF4O43474 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.5□□□□□ -1.85
KLF4O43474 AP003733.2-201ENST00000529409 171 ntBASIC3.5□□□□□ -1.85
KLF4O43474 AC105245.1-201ENST00000581934 244 ntBASIC3.5□□□□□ -1.85
KLF4O43474 MIR5006-201ENST00000583027 110 ntBASIC3.5□□□□□ -1.85
KLF4O43474 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 AL137849.1-201ENST00000604767 169 ntBASIC3.5□□□□□ -1.85
KLF4O43474 MIR376A1-201ENST00000616574 68 ntBASIC3.5□□□□□ -1.85
KLF4O43474 MIR5739-201ENST00000619803 80 ntBASIC3.5□□□□□ -1.85
KLF4O43474 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
KLF4O43474 AC092435.3-201ENST00000565538 3654 ntBASIC3.5□□□□□ -1.85
KLF4O43474 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KLF4O43474 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
KLF4O43474 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KLF4O43474 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
KLF4O43474 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.49□□□□□ -1.85
KLF4O43474 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
KLF4O43474 Y_RNA.143-201ENST00000363520 106 ntBASIC3.49□□□□□ -1.85
KLF4O43474 AL079342.1-201ENST00000401460 267 ntBASIC3.49□□□□□ -1.85
KLF4O43474 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
KLF4O43474 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.49□□□□□ -1.85
KLF4O43474 AC096920.1-201ENST00000423991 241 ntBASIC3.49□□□□□ -1.85
KLF4O43474 UQCRBP2-201ENST00000447827 297 ntBASIC3.49□□□□□ -1.85
KLF4O43474 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.49□□□□□ -1.85
KLF4O43474 AC080013.2-201ENST00000460866 323 ntBASIC3.49□□□□□ -1.85
KLF4O43474 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
KLF4O43474 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
KLF4O43474 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.49□□□□□ -1.85
KLF4O43474 AC023824.2-201ENST00000566185 400 ntBASIC3.49□□□□□ -1.85
KLF4O43474 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.49□□□□□ -1.85
KLF4O43474 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
KLF4O43474 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.49□□□□□ -1.85
KLF4O43474 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.49□□□□□ -1.85
KLF4O43474 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KLF4O43474 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
KLF4O43474 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KLF4O43474 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLF4O43474 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLF4O43474 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLF4O43474 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KLF4O43474 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
KLF4O43474 Y_RNA.64-201ENST00000362845 102 ntBASIC3.48□□□□□ -1.85
KLF4O43474 Y_RNA.288-201ENST00000364854 92 ntBASIC3.48□□□□□ -1.85
KLF4O43474 Y_RNA.461-201ENST00000384263 103 ntBASIC3.48□□□□□ -1.85
KLF4O43474 MIR1294-201ENST00000408503 142 ntBASIC3.48□□□□□ -1.85
KLF4O43474 RNU5A-5P-201ENST00000411054 116 ntBASIC3.48□□□□□ -1.85
KLF4O43474 RNU6-130P-201ENST00000411112 103 ntBASIC3.48□□□□□ -1.85
KLF4O43474 AL390729.2-201ENST00000416137 156 ntBASIC3.48□□□□□ -1.85
KLF4O43474 CBX3P6-201ENST00000430257 527 ntBASIC3.48□□□□□ -1.85
KLF4O43474 AC004386.2-201ENST00000441858 148 ntBASIC3.48□□□□□ -1.85
KLF4O43474 CYCSP35-201ENST00000451978 304 ntBASIC3.48□□□□□ -1.85
KLF4O43474 LINC01399-202ENST00000458450 244 ntBASIC3.48□□□□□ -1.85
KLF4O43474 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.48□□□□□ -1.85
KLF4O43474 AC023141.11-201ENST00000508864 202 ntBASIC3.48□□□□□ -1.85
KLF4O43474 SNORA40.9-201ENST00000515895 93 ntBASIC3.48□□□□□ -1.85
KLF4O43474 RNA5SP208-201ENST00000516156 78 ntBASIC3.48□□□□□ -1.85
KLF4O43474 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.48□□□□□ -1.85
KLF4O43474 MIR3616-201ENST00000584070 92 ntBASIC3.48□□□□□ -1.85
KLF4O43474 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.48□□□□□ -1.85
KLF4O43474 AC006006.1-201ENST00000603082 144 ntBASIC3.48□□□□□ -1.85
KLF4O43474 AC011476.5-201ENST00000615594 130 ntBASIC3.48□□□□□ -1.85
KLF4O43474 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.48□□□□□ -1.85
KLF4O43474 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.48□□□□□ -1.85
KLF4O43474 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
KLF4O43474 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.47□□□□□ -1.85
KLF4O43474 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
KLF4O43474 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KLF4O43474 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KLF4O43474 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms