Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AIMP1P2-201ENST00000425294 312 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 AC027124.2-201ENST00000428249 105 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 HSPE1P7-201ENST00000604681 321 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AC092435.4-201ENST00000623012 4159 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 RNU4-15P-201ENST00000362613 141 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-1048P-201ENST00000364054 107 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.337-201ENST00000365312 102 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 MIR539-201ENST00000365690 78 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AL133475.1-201ENST00000404414 305 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 RPL23AP82-202ENST00000427528 469 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 RPL23AP70-201ENST00000483361 460 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 SCARNA8-201ENST00000515924 131 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AC005086.4-201ENST00000623065 213 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 AC008873.1-201ENST00000625051 138 ntBASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHB9Q9Y5E1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.24-201ENST00000362508 103 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.172-201ENST00000363765 102 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 U3.9-201ENST00000363823 204 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.361-201ENST00000365515 120 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 SNORA20-201ENST00000384662 132 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.572-201ENST00000384757 98 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 MIR554-201ENST00000384874 96 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 MIR526A2-201ENST00000390198 65 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 RN7SKP177-201ENST00000410567 355 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 snoU13.28-201ENST00000459235 104 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 RN7SL98P-201ENST00000462271 300 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-453P-201ENST00000516819 85 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 MIR5006-201ENST00000583027 110 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 AL391813.1-201ENST00000603098 260 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 AC069200.1-201ENST00000609511 323 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 AL391903.3-201ENST00000612158 163 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 MIR6891-201ENST00000618788 93 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 MIR3653-201ENST00000625572 110 ntBASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
PCDHB9Q9Y5E1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHB9Q9Y5E1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHB9Q9Y5E1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 SPRR2C-201ENST00000290702 219 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 RNA5SP366-201ENST00000365454 123 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 U1.1-201ENST00000384101 164 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 Y_RNA.456-201ENST00000384232 111 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 MIR670-201ENST00000390142 98 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-855P-201ENST00000410395 104 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AC245291.1-201ENST00000419501 328 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AL035461.1-201ENST00000421490 332 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 RPL23AP58-201ENST00000440453 469 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AC091179.1-201ENST00000461606 579 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-1007P-201ENST00000516586 107 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 RNU6-919P-201ENST00000516731 104 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 RNU1-117P-201ENST00000517041 158 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AP003730.1-201ENST00000524605 285 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 MIR5688-201ENST00000580619 83 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 AL160290.3-201ENST00000604869 165 ntBASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB9Q9Y5E1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB9Q9Y5E1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms