Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 POLHP1-201ENST00000411806 470 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 DPH3P2-201ENST00000422618 250 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 MTND3P16-201ENST00000452205 344 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-333P-201ENST00000459117 107 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 RPL30P1-201ENST00000488676 339 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AK3P2-201ENST00000507976 429 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC034114.1-201ENST00000520293 285 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 COPS8P3-201ENST00000526024 482 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 CENPUP1-201ENST00000526649 1202 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC016957.1-201ENST00000534895 309 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC018630.3-201ENST00000542637 96 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 YWHAEP7-203ENST00000622054 312 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 SNORD73A-201ENST00000386062 65 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-648P-201ENST00000410190 107 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 SEPT14P3-201ENST00000439401 183 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC096638.1-201ENST00000444678 216 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AL732372.2-207ENST00000445840 183 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 SEPT14P2-201ENST00000453405 183 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC013470.1-201ENST00000453438 462 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC018868.1-201ENST00000491307 315 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 SEPT14P4-201ENST00000513445 186 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 SNORA14.1-201ENST00000516113 141 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 FO082796.1-201ENST00000523795 183 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC115990.1-201ENST00000526957 301 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 MIR4648-201ENST00000580107 72 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AC091135.1-201ENST00000585943 307 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 AL162413.1-201ENST00000603198 110 ntBASIC2.04□□□□□ -2.08
ATG4BQ9Y4P1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 SNORA6-201ENST00000384033 151 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-692P-201ENST00000384496 107 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 RN7SKP284-201ENST00000411002 343 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AL117339.3-201ENST00000418733 162 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AC243964.1-201ENST00000441814 261 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 RPS29P21-201ENST00000496272 170 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 Y_RNA.655-201ENST00000515919 96 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-720P-201ENST00000516363 108 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 CYCSP27-201ENST00000527643 293 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AC092807.2-201ENST00000609367 243 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AL121757.2-201ENST00000611223 313 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 AC241585.2-209ENST00000638217 143 ntBASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.03□□□□□ -2.08
ATG4BQ9Y4P1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.03□□□□□ -2.09
ATG4BQ9Y4P1 OR4G1P-203ENST00000641984 1631 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 SNORA51.11-201ENST00000384442 131 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AL591034.2-201ENST00000402839 359 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 SNORA11.4-201ENST00000408823 129 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 WARS2P1-201ENST00000429678 537 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AL513124.1-201ENST00000450410 614 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 RNU7-138P-201ENST00000459479 64 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC091435.1-201ENST00000505442 584 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-323P-201ENST00000521915 107 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC026271.5-201ENST00000577873 130 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 MIR4529-201ENST00000578110 78 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 BNIP3P16-201ENST00000589779 534 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC010525.2-201ENST00000590920 195 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms