Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC073073.2-201ENST00000609827 2578 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 U1.1-201ENST00000384101 164 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 CYCSP19-201ENST00000411715 316 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC138623.1-201ENST00000418060 216 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC019205.3-201ENST00000424573 156 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC010095.1-201ENST00000443543 144 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC008749.1-201ENST00000597650 306 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AL078605.1-201ENST00000603529 500 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC010999.1-201ENST00000611856 324 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC004944.1-201ENST00000517807 3059 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD1Q96NR3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 RNA5SP322-201ENST00000363617 119 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 RNU6-514P-201ENST00000384208 107 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 MIR554-201ENST00000384874 96 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 MIR134-201ENST00000385258 73 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 PTMAP5-201ENST00000393073 333 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 PCNPP3-201ENST00000393579 471 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 SNORA57.3-201ENST00000411095 141 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC112220.1-201ENST00000434628 355 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 RNU7-120P-201ENST00000459334 63 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 RPL23AP62-201ENST00000463396 453 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 SNORA31.16-201ENST00000516773 139 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC023632.4-201ENST00000517783 191 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AP002392.1-201ENST00000537692 208 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC005176.2-201ENST00000596933 147 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AL357075.2-201ENST00000614906 189 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 MIR6076-201ENST00000617521 113 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 AC135776.4-201ENST00000624300 1904 ntBASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD1Q96NR3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.84
PTCHD1Q96NR3 AL136164.4-201ENST00000625013 2135 ntBASIC3.59□□□□□ -1.84
PTCHD1Q96NR3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PTCHD1Q96NR3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCHD1Q96NR3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PTCHD1Q96NR3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCHD1Q96NR3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.275-201ENST00000364726 110 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 RNY4P28-201ENST00000365281 93 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 RNU1-89P-201ENST00000384592 164 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.626-201ENST00000411288 95 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 RHEBP3-201ENST00000411920 351 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AL591419.1-201ENST00000427423 339 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 COX6CP14-201ENST00000469580 174 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AC090525.1-201ENST00000479116 478 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 RPL30P14-201ENST00000482744 348 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AC107393.1-201ENST00000512403 346 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 SNORA25.14-201ENST00000516481 132 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 RNU1-45P-201ENST00000517191 141 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AC115990.1-201ENST00000526957 301 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AC006130.2-201ENST00000586202 326 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 KLKP1-201ENST00000595979 403 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 AC006001.4-201ENST00000622243 395 ntBASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD1Q96NR3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms