Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU6-639P-201ENST00000384074 107 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 RNY1P14-201ENST00000384426 108 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 MIR186-201ENST00000384988 86 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NKX6-1P78426 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 Y_RNA.605-201ENST00000410577 105 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX6-1P78426 RBMY2UP-201ENST00000453474 324 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 AC090525.1-201ENST00000479116 478 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX6-1P78426 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX6-1P78426 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX6-1P78426 IGHV3-76-201ENST00000522465 295 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX6-1P78426 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
NKX6-1P78426 AC022432.1-201ENST00000595739 310 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 RMST_6.1-201ENST00000611980 203 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 AC040896.1-201ENST00000613819 479 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 AL138825.1-201ENST00000618587 192 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 MIR6852-201ENST00000621699 66 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 AP003355.3-201ENST00000623465 114 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 SNORD98-201ENST00000636377 67 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX6-1P78426 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX6-1P78426 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX6-1P78426 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NKX6-1P78426 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NKX6-1P78426 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.07□□□□□ -1.92
NKX6-1P78426 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX6-1P78426 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX6-1P78426 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX6-1P78426 RNU5B-2P-201ENST00000363036 113 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 Y_RNA.162-201ENST00000363683 102 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 RNU6-1210P-201ENST00000363775 107 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 SNORD115-32-201ENST00000364079 82 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 RNU6-1032P-201ENST00000384100 107 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR32-201ENST00000384965 70 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 SNORA69.1-201ENST00000390904 137 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 SNORA26.3-201ENST00000391119 136 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 U3.39-201ENST00000408569 239 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 AC006445.1-201ENST00000491925 405 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 RPL23AP94-201ENST00000512518 302 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 SNORA70.18-201ENST00000516696 98 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 GNAI2P1-201ENST00000541815 315 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX6-1P78426 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR4738-201ENST00000579134 87 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 AC103810.1-201ENST00000579873 453 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR3124-201ENST00000582636 67 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR1244-1-201ENST00000612829 85 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 AC007485.1-201ENST00000616755 206 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR1244-3-201ENST00000635744 85 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR1244-2-201ENST00000636449 85 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 MIR1244-4-202ENST00000636813 85 ntBASIC3.07□□□□□ -1.92
NKX6-1P78426 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NKX6-1P78426 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX6-1P78426 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX6-1P78426 AC073073.2-201ENST00000609827 2578 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
NKX6-1P78426 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX6-1P78426 RNA5SP42-201ENST00000364278 115 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 Y_RNA.496-201ENST00000384444 101 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 MIR153-2-201ENST00000385225 87 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 MIR190B-201ENST00000401119 79 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NKX6-1P78426 AC012306.1-201ENST00000423267 114 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 MTCO3P29-201ENST00000432119 779 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 Z82188.1-201ENST00000436709 154 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX6-1P78426 GSTA11P-201ENST00000452866 669 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 RPS27P29-201ENST00000463110 252 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 AC025518.1-201ENST00000479856 347 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 HMGB1P35-201ENST00000503360 598 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 SNORA25.11-201ENST00000515935 105 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 RNU5F-2P-201ENST00000516066 82 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 RNU2-53P-201ENST00000516257 147 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.06□□□□□ -1.92
NKX6-1P78426 NDUFB9P3-201ENST00000521269 501 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX6-1P78426 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NKX6-1P78426 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX6-1P78426 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.06□□□□□ -1.92
NKX6-1P78426 MIR7515-201ENST00000637837 67 ntBASIC3.06□□□□□ -1.92
NKX6-1P78426 AC010329.5-201ENST00000623497 2174 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
NKX6-1P78426 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
NKX6-1P78426 Y_RNA.148-201ENST00000363557 117 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 RNU6-541P-201ENST00000384709 110 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 MRPL42P3-201ENST00000401492 326 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 DBIP2-201ENST00000419076 262 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX6-1P78426 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.05□□□□□ -1.92
NKX6-1P78426 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 AF186996.7-201ENST00000492781 209 ntBASIC3.05□□□□□ -1.92
NKX6-1P78426 RNU6-1198P-201ENST00000516904 67 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms