Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNA5SP137-201ENST00000516833 135 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 RN7SKP256-201ENST00000517201 314 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC069113.1-201ENST00000517763 267 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC109479.2-201ENST00000517842 174 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC093249.1-201ENST00000567049 203 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 VN1R80P-201ENST00000597126 338 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-85P-201ENST00000605989 107 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC004492.1-201ENST00000607036 742 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AF250324.2-201ENST00000608299 610 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC087241.4-201ENST00000612441 480 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC090517.3-201ENST00000625170 141 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-105P-201ENST00000363909 104 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 MIR544A-201ENST00000384855 91 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-293P-201ENST00000411259 106 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 USP9YP18-201ENST00000425912 695 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC007969.2-201ENST00000441891 191 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 USP9YP8-201ENST00000441913 500 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 RPL39P29-201ENST00000447779 157 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AL353705.4-201ENST00000449661 238 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC019235.1-201ENST00000503847 207 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-835P-201ENST00000516974 104 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 MIR4424-201ENST00000585257 86 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC078899.2-201ENST00000595282 212 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 VN1R107P-201ENST00000601784 209 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC092747.3-201ENST00000603769 301 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AL670379.2-201ENST00000604983 252 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC116312.1-201ENST00000606841 314 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC064807.4-201ENST00000607201 407 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.07□□□□□ -2.08
ATG4BQ9Y4P1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 SNORA25B-201ENST00000365507 128 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-827P-201ENST00000365553 106 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNU4-20P-201ENST00000365601 151 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-483P-201ENST00000384088 108 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AL590002.1-201ENST00000406554 418 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 EDDM3CP-201ENST00000415977 425 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AIMP1P2-201ENST00000425294 312 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 TIMM9P3-201ENST00000428659 274 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RPL21P99-201ENST00000480369 423 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-189P-201ENST00000516120 101 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AK6P1-201ENST00000540219 478 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 SNRPGP18-201ENST00000553000 214 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC090115.3-201ENST00000553218 849 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 OR11H5P-201ENST00000554039 926 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC103996.1-201ENST00000555468 102 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AL118558.2-201ENST00000556294 238 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC026464.5-201ENST00000562497 722 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 HMGB1P33-201ENST00000563485 527 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 MIR3126-201ENST00000577443 74 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.06□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-336P-201ENST00000364891 107 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-38P-201ENST00000384085 107 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 SNORD116-4-201ENST00000384733 96 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 MIR29B2-201ENST00000385055 81 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 SNORA40.19-201ENST00000390846 128 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.05□□□□□ -2.08
ATG4BQ9Y4P1 RNA5SP270-201ENST00000411361 118 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms