Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 RNU6-626P-201ENST00000363354 107 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 RNU6-886P-201ENST00000384319 105 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 AC117440.1-201ENST00000474107 571 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 RPL30P12-201ENST00000474666 353 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 AC026726.1-201ENST00000512859 601 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 AC090897.2-201ENST00000581715 130 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 AC034229.5-201ENST00000624258 185 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 MIR3199-2-201ENST00000636243 86 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RNU6-487P-201ENST00000365430 104 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RNU6-20P-201ENST00000384106 107 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RNU6-622P-201ENST00000384272 103 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 SNORA1.3-201ENST00000384676 136 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 SNORA26.3-201ENST00000391119 136 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RN7SKP202-201ENST00000410439 330 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RN7SKP53-201ENST00000411337 315 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AP000705.1-201ENST00000454567 350 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 SNORA40.9-201ENST00000515895 93 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AC022695.1-201ENST00000522089 237 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 HMGN2P15-201ENST00000585707 270 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 HSPE1P7-201ENST00000604681 321 ntBASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCHD1Q96NR3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 MIR411-201ENST00000362239 96 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 RNU6-961P-201ENST00000363893 105 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AL591034.1-201ENST00000407447 340 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AL390729.2-201ENST00000416137 156 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AC012306.1-201ENST00000423267 114 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 RNA5SP54-201ENST00000516951 92 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 CBX3P4-201ENST00000538909 354 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 IPO8P1-201ENST00000455509 3109 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 AF117829.1-206ENST00000621883 3802 ntBASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCHD1Q96NR3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 SNORA25.1-201ENST00000362326 128 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RNU6-873P-201ENST00000363833 107 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RNU6-740P-201ENST00000364734 105 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RN7SKP156-201ENST00000410308 342 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RPS26P42-201ENST00000413485 326 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RPL23AP82-202ENST00000427528 469 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AL161651.1-201ENST00000440882 223 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 snoU13.28-201ENST00000459235 104 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AC024405.2-202ENST00000532731 184 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AL162424.1-201ENST00000602325 221 ntBASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCHD1Q96NR3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms