Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
EPHB3P54753 SNORA25.1-201ENST00000362326 128 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RNU6-78P-201ENST00000362897 107 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RNU6-173P-201ENST00000364215 104 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 Y_RNA.398-201ENST00000383952 99 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
EPHB3P54753 BTF3L4P2-201ENST00000392798 346 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 HSPE1P26-201ENST00000405341 275 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 MTHFD2P2-201ENST00000407725 247 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 U3.39-201ENST00000408569 239 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RNU2-37P-201ENST00000410695 177 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RNU5A-5P-201ENST00000411054 116 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RPL21P66-201ENST00000426566 466 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.76□□□□□ -1.81
EPHB3P54753 VDAC1P3-201ENST00000434069 851 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.76□□□□□ -1.81
EPHB3P54753 RPS15AP7-201ENST00000439294 405 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 SNORD2.1-201ENST00000458762 69 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RPL21P10-201ENST00000463521 490 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 Y_RNA.679-201ENST00000516416 91 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.76□□□□□ -1.81
EPHB3P54753 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
EPHB3P54753 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.76□□□□□ -1.81
EPHB3P54753 FAM60BP-201ENST00000578364 658 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 AL078605.1-201ENST00000603529 500 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 RPL23AP88-201ENST00000605759 454 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 MAPK10-253ENST00000641010 4072 ntBASIC3.76□□□□□ -1.81
EPHB3P54753 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
EPHB3P54753 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
EPHB3P54753 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
EPHB3P54753 BX322639.1-202ENST00000423987 2213 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AC093908.1-201ENST00000623125 8092 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
EPHB3P54753 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
EPHB3P54753 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.75□□□□□ -1.81
EPHB3P54753 Y_RNA.81-201ENST00000362997 102 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RNA5SP267-201ENST00000364893 126 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RNU6-926P-201ENST00000384075 107 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RNU6-1035P-201ENST00000384477 107 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 MIR491-201ENST00000384877 84 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RNU2-51P-201ENST00000410708 197 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RNU6-1135P-201ENST00000411083 103 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 BMS1P22-201ENST00000414726 313 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.75□□□□□ -1.81
EPHB3P54753 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.75□□□□□ -1.81
EPHB3P54753 AL078601.1-201ENST00000444542 271 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.75□□□□□ -1.81
EPHB3P54753 AC092798.1-201ENST00000458542 409 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AC073901.1-201ENST00000462471 408 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AC087477.1-201ENST00000465747 340 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RPL26P26-201ENST00000480251 434 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 RPL23AP75-201ENST00000491601 451 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.75□□□□□ -1.81
EPHB3P54753 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.75□□□□□ -1.81
EPHB3P54753 RNU6-1114P-201ENST00000516022 107 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.75□□□□□ -1.81
EPHB3P54753 H3F3AP1-201ENST00000559984 334 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.75□□□□□ -1.81
EPHB3P54753 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.75□□□□□ -1.81
EPHB3P54753 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
EPHB3P54753 AL359693.1-201ENST00000614959 2407 ntBASIC3.75□□□□□ -1.81
EPHB3P54753 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.75□□□□□ -1.81
EPHB3P54753 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
EPHB3P54753 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
EPHB3P54753 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
EPHB3P54753 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHB3P54753 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHB3P54753 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
EPHB3P54753 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
EPHB3P54753 Y_RNA.441-201ENST00000384123 112 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
EPHB3P54753 RNU4-30P-201ENST00000410245 143 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 DBIP2-201ENST00000419076 262 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 NDUFB4P7-201ENST00000423198 363 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 NDUFB1P1-201ENST00000435191 180 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 AC007395.1-201ENST00000451333 677 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 AC091959.1-201ENST00000495857 238 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 RNA5SP290-201ENST00000517133 127 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 MIR4782-201ENST00000577987 79 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.74□□□□□ -1.81
EPHB3P54753 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHB3P54753 AC104465.1-201ENST00000611365 139 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 U4.6-201ENST00000621618 127 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 AC027309.3-201ENST00000623419 351 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 AC018555.1-201ENST00000567548 1980 ntBASIC3.74□□□□□ -1.81
EPHB3P54753 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHB3P54753 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHB3P54753 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.74□□□□□ -1.81
EPHB3P54753 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
EPHB3P54753 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.73□□□□□ -1.81
EPHB3P54753 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
EPHB3P54753 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms