Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHS1O60500 AC078809.1-201ENST00000427601 140 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHS1O60500 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
NPHS1O60500 AC008011.1-201ENST00000545989 227 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHS1O60500 AC090897.2-201ENST00000581715 130 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 RMST_8.1-201ENST00000610287 165 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHS1O60500 MIR6830-201ENST00000636015 70 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 MIR3199-2-201ENST00000636243 86 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHS1O60500 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
NPHS1O60500 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NPHS1O60500 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPHS1O60500 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHS1O60500 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.83
NPHS1O60500 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHS1O60500 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHS1O60500 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPHS1O60500 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.59□□□□□ -1.83
NPHS1O60500 AC092268.1-201ENST00000342691 405 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 Y_RNA.29-201ENST00000362570 113 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 RNU6-1285P-201ENST00000363480 105 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 RNU6-137P-201ENST00000363680 108 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 SNORA1.3-201ENST00000384676 136 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 SNORA3.3-201ENST00000408712 125 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 RN7SKP53-201ENST00000411337 315 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.59□□□□□ -1.83
NPHS1O60500 AL358075.3-201ENST00000426289 226 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AC009220.1-201ENST00000451614 275 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AC073901.1-201ENST00000462471 408 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.59□□□□□ -1.83
NPHS1O60500 RNU6-567P-201ENST00000516746 107 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AC021231.3-201ENST00000558497 370 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AL078605.1-201ENST00000603529 500 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AL138963.2-201ENST00000605137 226 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 SNORD113-5-201ENST00000607261 78 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AC004792.1-201ENST00000614523 137 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AC127459.3-201ENST00000624328 466 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.59□□□□□ -1.83
NPHS1O60500 AP000553.6-201ENST00000641242 118 ntBASIC3.59□□□□□ -1.83
NPHS1O60500 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHS1O60500 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHS1O60500 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NPHS1O60500 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
NPHS1O60500 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
NPHS1O60500 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.58□□□□□ -1.84
NPHS1O60500 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPHS1O60500 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHS1O60500 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NPHS1O60500 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-1159P-201ENST00000362933 107 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-626P-201ENST00000363354 107 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 SNORD115-8-201ENST00000363856 82 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-961P-201ENST00000363893 105 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 Y_RNA.200-201ENST00000364018 102 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 SNORD115-38-201ENST00000365037 82 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-1145P-201ENST00000384246 107 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 MIR141-201ENST00000384975 95 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NPHS1O60500 AL033519.2-201ENST00000403958 392 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNA5SP390-201ENST00000410191 113 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-1140P-201ENST00000410517 106 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 AC023141.4-201ENST00000412031 328 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHS1O60500 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHS1O60500 AL161651.1-201ENST00000440882 223 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 SEPT14P8-201ENST00000508026 178 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 TGIF1P1-201ENST00000558095 802 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHS1O60500 MIR4423-201ENST00000580922 80 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.58□□□□□ -1.84
NPHS1O60500 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHS1O60500 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHS1O60500 HAUS6P2-201ENST00000433254 2404 ntBASIC3.58□□□□□ -1.84
NPHS1O60500 Y_RNA.150-201ENST00000363562 102 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 RNU6-487P-201ENST00000365430 104 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 SNORA62-201ENST00000365493 153 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NPHS1O60500 SNORA70C-201ENST00000384538 135 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 Y_RNA.555-201ENST00000384673 110 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 SNORA53-201ENST00000391141 249 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHS1O60500 MIR1298-201ENST00000408783 112 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 RNU5A-5P-201ENST00000411054 116 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 RNU4-61P-201ENST00000411243 107 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 Y_RNA.625-201ENST00000411256 107 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 AC012306.1-201ENST00000423267 114 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.57□□□□□ -1.84
NPHS1O60500 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms