Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL23AP48-201ENST00000406913 488 ntBASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 RAC1P3-201ENST00000416129 580 ntBASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 Y_RNA.680-201ENST00000516441 93 ntBASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 MIR4474-201ENST00000579189 78 ntBASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 MIR7702-201ENST00000621931 59 ntBASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM88BA6NKF7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 RNA5SP502-201ENST00000362694 119 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 Y_RNA.230-201ENST00000364348 109 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 MIR215-201ENST00000384858 110 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 RNU6-1001P-201ENST00000411265 100 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AC005002.2-201ENST00000438228 269 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AL031183.1-201ENST00000457667 207 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 RPL23AP65-201ENST00000475608 468 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 SNORA25.14-201ENST00000516481 132 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 SNORA31.16-201ENST00000516773 139 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 IGKV2-38-201ENST00000517443 247 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AK6P2-201ENST00000549020 471 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AC027176.1-201ENST00000560204 514 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 MIR7112-201ENST00000616126 65 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM88BA6NKF7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 RNA5SP126-201ENST00000365092 109 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 RNU6-290P-201ENST00000365212 101 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 RNU6-1145P-201ENST00000384246 107 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 MIR199A2-201ENST00000385289 110 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 RNA5SP354-201ENST00000391247 136 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 AL031121.1-201ENST00000406553 254 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 RBMY2UP-201ENST00000453474 324 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 snoU13.14-201ENST00000459372 104 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 AC007215.1-201ENST00000464893 276 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 AC117440.1-201ENST00000474107 571 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 Y_RNA.683-201ENST00000516508 93 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 AL034555.1-201ENST00000604816 211 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 BX284668.6-201ENST00000606899 438 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 BX322639.1-202ENST00000423987 2213 ntBASIC4.44□□□□□ -1.7
TMEM88BA6NKF7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 LINC01355-201ENST00000566551 5444 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 SNORD9-201ENST00000362566 104 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 RNU6-873P-201ENST00000363833 107 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 Y_RNA.179-201ENST00000363844 90 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 SNORD27-201ENST00000363981 72 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 MIR329-1-201ENST00000385028 80 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AL133475.1-201ENST00000404414 305 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 RNU2-20P-201ENST00000410425 191 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AL445305.1-201ENST00000432577 575 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AC083863.1-201ENST00000438811 231 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 RNA5SP103-201ENST00000459503 118 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 RNU5F-2P-201ENST00000516066 82 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 AC005520.5-201ENST00000613926 164 ntBASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMEM88BA6NKF7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 ZNF204P-201ENST00000416749 2397 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms