Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 DEFB108E-201ENST00000524692 240 ntBASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 AC123904.2-201ENST00000548059 300 ntBASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 AC136619.2-201ENST00000563361 631 ntBASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SHANK3Q9BYB0 RNU6-858P-201ENST00000362436 107 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.390-201ENST00000383932 102 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RNU6-622P-201ENST00000384272 103 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL356432.1-201ENST00000405809 419 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RNA5SP390-201ENST00000410191 113 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL353621.1-201ENST00000418219 243 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL365338.1-201ENST00000422282 858 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RPL23AP30-201ENST00000432419 501 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 MTCYBP39-201ENST00000437562 491 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL139824.2-201ENST00000458731 1095 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC091951.3-201ENST00000504093 246 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RNU7-51P-201ENST00000516560 62 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AP005597.4-201ENST00000526762 229 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 CBX3P7-201ENST00000532876 502 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 ADI1P3-201ENST00000549509 470 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC091489.2-201ENST00000566263 604 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 MIR3118-1-201ENST00000581787 76 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC107952.2-201ENST00000606048 486 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RNU5A-2P-201ENST00000384337 116 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.623-201ENST00000411128 95 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL008629.1-201ENST00000438615 184 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RPL22P17-201ENST00000438729 315 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC118469.1-201ENST00000442943 488 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RPL23AP3-201ENST00000453844 468 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 MTND2P39-201ENST00000457230 764 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 RNU1-98P-201ENST00000458992 160 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC116347.2-201ENST00000514912 523 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 SNORA25.11-201ENST00000515935 105 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AP003461.1-201ENST00000528866 78 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 TMF1P1-201ENST00000576058 373 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL353778.1-201ENST00000603149 408 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 SNRPGP17-201ENST00000603780 214 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC105148.1-201ENST00000604961 409 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL031775.1-201ENST00000607014 887 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AL139418.1-201ENST00000613613 177 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 AC006927.3-201ENST00000638789 384 ntBASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.60-201ENST00000362831 98 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 RNU6-487P-201ENST00000365430 104 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 MRPL42P2-201ENST00000403169 426 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC138623.1-201ENST00000418060 216 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC093106.2-201ENST00000428212 385 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AL353689.1-201ENST00000438895 199 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 MTND1P12-201ENST00000455231 147 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC006512.1-201ENST00000468816 291 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 TPT1P8-201ENST00000510120 555 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 ELOCP32-201ENST00000548625 324 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 MIR4698-201ENST00000577795 80 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 BNIP3P40-201ENST00000596017 556 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AL138889.2-201ENST00000603883 242 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 FAM71BP1-201ENST00000604431 523 ntBASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.97-201ENST00000363094 102 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 SNORA16B-201ENST00000364674 135 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 RNU6-17P-201ENST00000384245 107 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 RNU6-18P-201ENST00000384527 107 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 RNU2-8P-201ENST00000410727 190 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 RNA5SP450-201ENST00000411206 102 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AL512286.1-201ENST00000439244 400 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AL009048.1-201ENST00000450437 298 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 SNORD11.1-201ENST00000459482 85 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 MTCO2P29-201ENST00000465212 189 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 RPL30P6-201ENST00000475925 342 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 RNU6-311P-201ENST00000516224 102 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 SNORA48.11-201ENST00000517015 89 ntBASIC1.24□□□□□ -2.21
SHANK3Q9BYB0 AC022878.1-201ENST00000530684 149 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms