Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AC069528.2-201ENST00000624849 1991 ntBASIC3.62□□□□□ -1.83
KLF4O43474 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KLF4O43474 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
KLF4O43474 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KLF4O43474 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.61□□□□□ -1.83
KLF4O43474 U3.9-201ENST00000363823 204 ntBASIC3.61□□□□□ -1.83
KLF4O43474 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KLF4O43474 RNU6-245P-201ENST00000384020 107 ntBASIC3.61□□□□□ -1.83
KLF4O43474 Y_RNA.439-201ENST00000384119 94 ntBASIC3.61□□□□□ -1.83
KLF4O43474 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.61□□□□□ -1.83
KLF4O43474 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KLF4O43474 FCF1P4-201ENST00000448326 183 ntBASIC3.61□□□□□ -1.83
KLF4O43474 AL500522.2-201ENST00000448562 343 ntBASIC3.61□□□□□ -1.83
KLF4O43474 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.61□□□□□ -1.83
KLF4O43474 U8.22-201ENST00000459141 133 ntBASIC3.61□□□□□ -1.83
KLF4O43474 SNORA84-201ENST00000459229 133 ntBASIC3.61□□□□□ -1.83
KLF4O43474 RPL21P129-201ENST00000491732 478 ntBASIC3.61□□□□□ -1.83
KLF4O43474 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.61□□□□□ -1.83
KLF4O43474 RNY3P15-201ENST00000516297 97 ntBASIC3.61□□□□□ -1.83
KLF4O43474 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
KLF4O43474 AC093023.1-201ENST00000547375 507 ntBASIC3.61□□□□□ -1.83
KLF4O43474 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.61□□□□□ -1.83
KLF4O43474 RPL30P11-203ENST00000598995 310 ntBASIC3.61□□□□□ -1.83
KLF4O43474 U4.1-201ENST00000620349 87 ntBASIC3.61□□□□□ -1.83
KLF4O43474 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KLF4O43474 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KLF4O43474 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KLF4O43474 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KLF4O43474 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KLF4O43474 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KLF4O43474 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
KLF4O43474 RNA5SP399-201ENST00000364003 117 ntBASIC3.6□□□□□ -1.83
KLF4O43474 RNU6-611P-201ENST00000384276 104 ntBASIC3.6□□□□□ -1.83
KLF4O43474 MIR10B-201ENST00000385011 110 ntBASIC3.6□□□□□ -1.83
KLF4O43474 MIR29B2-201ENST00000385055 81 ntBASIC3.6□□□□□ -1.83
KLF4O43474 RN7SKP202-201ENST00000410439 330 ntBASIC3.6□□□□□ -1.83
KLF4O43474 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
KLF4O43474 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.6□□□□□ -1.83
KLF4O43474 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.6□□□□□ -1.83
KLF4O43474 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
KLF4O43474 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.6□□□□□ -1.83
KLF4O43474 CYCSP23-201ENST00000519781 313 ntBASIC3.6□□□□□ -1.83
KLF4O43474 COX6CP5-201ENST00000527162 228 ntBASIC3.6□□□□□ -1.83
KLF4O43474 EIF4A1P12-201ENST00000551910 141 ntBASIC3.6□□□□□ -1.83
KLF4O43474 AC026470.2-201ENST00000561492 181 ntBASIC3.6□□□□□ -1.83
KLF4O43474 AC004817.2-201ENST00000561794 651 ntBASIC3.6□□□□□ -1.83
KLF4O43474 AL133393.1-201ENST00000603277 287 ntBASIC3.6□□□□□ -1.83
KLF4O43474 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
KLF4O43474 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KLF4O43474 U6.92-201ENST00000636464 89 ntBASIC3.6□□□□□ -1.83
KLF4O43474 MIR7515-201ENST00000637837 67 ntBASIC3.6□□□□□ -1.83
KLF4O43474 BX322639.1-202ENST00000423987 2213 ntBASIC3.6□□□□□ -1.83
KLF4O43474 ZNF204P-201ENST00000416749 2397 ntBASIC3.6□□□□□ -1.83
KLF4O43474 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
KLF4O43474 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.59□□□□□ -1.83
KLF4O43474 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KLF4O43474 RNU1-18P-201ENST00000363062 164 ntBASIC3.59□□□□□ -1.83
KLF4O43474 Y_RNA.183-201ENST00000363882 113 ntBASIC3.59□□□□□ -1.83
KLF4O43474 RNU6-281P-201ENST00000384212 103 ntBASIC3.59□□□□□ -1.83
KLF4O43474 RNU6-708P-201ENST00000384217 107 ntBASIC3.59□□□□□ -1.83
KLF4O43474 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
KLF4O43474 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.59□□□□□ -1.83
KLF4O43474 AC112220.1-201ENST00000434628 355 ntBASIC3.59□□□□□ -1.83
KLF4O43474 RPEP5-201ENST00000441137 268 ntBASIC3.59□□□□□ -1.83
KLF4O43474 IPO7P1-201ENST00000442031 636 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AL731563.1-201ENST00000442202 214 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.59□□□□□ -1.83
KLF4O43474 AC073901.1-201ENST00000462471 408 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC145146.1-201ENST00000496370 254 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.59□□□□□ -1.83
KLF4O43474 RNU6-397P-201ENST00000516226 104 ntBASIC3.59□□□□□ -1.83
KLF4O43474 SNORA25.14-201ENST00000516481 132 ntBASIC3.59□□□□□ -1.83
KLF4O43474 RN7SKP49-201ENST00000516675 260 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.59□□□□□ -1.83
KLF4O43474 YPEL5P3-201ENST00000547227 352 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
KLF4O43474 UBL5P4-201ENST00000562584 236 ntBASIC3.59□□□□□ -1.83
KLF4O43474 RN7SL703P-201ENST00000578485 302 ntBASIC3.59□□□□□ -1.83
KLF4O43474 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.59□□□□□ -1.83
KLF4O43474 MIR3149-201ENST00000584629 83 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.59□□□□□ -1.83
KLF4O43474 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
KLF4O43474 MIR6868-201ENST00000611215 58 ntBASIC3.59□□□□□ -1.83
KLF4O43474 PCGEM1.1-201ENST00000613431 131 ntBASIC3.59□□□□□ -1.83
KLF4O43474 AC010205.1-201ENST00000616668 449 ntBASIC3.59□□□□□ -1.83
KLF4O43474 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KLF4O43474 Z82217.1-201ENST00000625157 8149 ntBASIC3.59□□□□□ -1.84
KLF4O43474 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KLF4O43474 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
KLF4O43474 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KLF4O43474 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.58□□□□□ -1.84
KLF4O43474 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KLF4O43474 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
KLF4O43474 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.58□□□□□ -1.84
KLF4O43474 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KLF4O43474 snoU2_19.1-201ENST00000362361 80 ntBASIC3.58□□□□□ -1.84
KLF4O43474 RNU6-770P-201ENST00000363929 105 ntBASIC3.58□□□□□ -1.84
KLF4O43474 SET-203ENST00000372688 801 ntTSL 2 BASIC3.58□□□□□ -1.84
KLF4O43474 Y_RNA.401-201ENST00000383965 117 ntBASIC3.58□□□□□ -1.84
KLF4O43474 Y_RNA.452-201ENST00000384202 108 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms