Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AL008629.1-201ENST00000438615 184 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 ZNF886P-201ENST00000450781 723 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 snoU109.2-201ENST00000459316 135 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 MTND2P33-201ENST00000506452 1031 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AF131216.2-201ENST00000512316 564 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AC104417.1-201ENST00000523974 751 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AC022432.1-201ENST00000595739 310 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR3976-201ENST00000606807 139 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AL355816.2-201ENST00000610049 647 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AL365204.3-201ENST00000612448 685 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-468P-201ENST00000384003 109 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 Y_RNA.623-201ENST00000411128 95 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AL359704.1-201ENST00000411586 781 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 HMGN1P14-201ENST00000412459 517 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 TIMM9P2-201ENST00000419324 266 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 Z82205.1-201ENST00000428456 297 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AP000542.1-201ENST00000448473 371 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 TOMM22P6-201ENST00000465035 409 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR3912-201ENST00000577566 105 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC091135.1-201ENST00000585943 307 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 VN1R87P-201ENST00000596706 487 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC098483.2-201ENST00000603158 454 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AL359821.1-201ENST00000605519 182 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC022893.3-201ENST00000607665 437 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC084824.5-201ENST00000612009 413 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 AC009541.1-201ENST00000438279 2662 ntBASIC0.42□□□□□ -2.34
TRAV13-1A0A0B4J241 RNA5SP361-201ENST00000362686 118 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 Y_RNA.124-201ENST00000363339 93 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-777P-201ENST00000364265 104 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR200A-201ENST00000384875 90 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 AL953862.1-201ENST00000423016 168 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 RPS26P45-201ENST00000471748 340 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 RPS27P22-201ENST00000478056 241 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 BET1P1-201ENST00000482276 359 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 SUMO2P5-201ENST00000506790 245 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 RN7SKP49-201ENST00000516675 260 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 DEFB108A-201ENST00000530110 222 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 BNIP3P8-201ENST00000597863 560 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 AL136363.2-201ENST00000604173 851 ntBASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV13-1A0A0B4J241 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU4-79P-201ENST00000362764 141 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-862P-201ENST00000362804 105 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 RNA5SP259-201ENST00000365541 109 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-910P-201ENST00000390844 107 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORD12-201ENST00000391002 90 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 Y_RNA.595-201ENST00000410403 105 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 BTF3L4P1-201ENST00000413813 468 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AC002429.1-201ENST00000437672 148 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 SNRPEP8-201ENST00000442866 260 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 EEF1E1P1-201ENST00000446998 430 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 MTND1P18-201ENST00000448191 573 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 PAXBP1P1-201ENST00000449315 447 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 ATP5J2P3-201ENST00000451550 258 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU5F-2P-201ENST00000516066 82 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AL442163.3-201ENST00000554110 156 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AL512347.1-201ENST00000566420 503 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AC133485.1-201ENST00000567176 124 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AC138907.6-201ENST00000568401 126 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 BNIP3P16-201ENST00000589779 534 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 AC099654.8-201ENST00000637757 681 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
TRAV13-1A0A0B4J241 OR4G2P-201ENST00000328113 903 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR373-201ENST00000362273 69 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-236P-201ENST00000363886 106 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-17P-201ENST00000384245 107 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-18P-201ENST00000384527 107 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR520E-201ENST00000384867 87 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-278P-201ENST00000390945 109 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR1305-201ENST00000408300 86 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AL355994.1-201ENST00000424379 260 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AL627311.1-201ENST00000431514 115 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MTCO3P29-201ENST00000432119 779 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC069257.2-201ENST00000441819 155 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MTCYBP42-201ENST00000444653 1130 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms