Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 RNU1-105P-201ENST00000363470 161 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 Y_RNA.462-201ENST00000384268 102 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 RNU6-1077P-201ENST00000410506 102 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC009310.1-201ENST00000414414 451 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 CYCSP4-201ENST00000429682 331 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 HMGN2P20-201ENST00000437531 273 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 HMGB1P37-201ENST00000439613 609 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC108022.1-201ENST00000493466 478 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 HMGB1P35-201ENST00000503360 598 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 CYCSP23-201ENST00000519781 313 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC022695.1-201ENST00000522089 237 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC023824.2-201ENST00000566185 400 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 RPS15AP11-201ENST00000594193 385 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 uc_338.32-201ENST00000615087 172 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC078938.1-201ENST00000620993 318 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 AC008725.1-201ENST00000605123 2263 ntBASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC011266.1-201ENST00000624119 3569 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 RNU6-926P-201ENST00000384075 107 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 SNORD63-201ENST00000384262 68 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 MIR10B-201ENST00000385011 110 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 U3.19-201ENST00000390893 196 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AL033519.2-201ENST00000403958 392 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 RNU5A-5P-201ENST00000411054 116 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AL390729.2-201ENST00000416137 156 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 MTND4LP30-201ENST00000454092 297 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC025518.1-201ENST00000479856 347 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 GZMAP1-201ENST00000503054 631 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AIG1P1-201ENST00000503376 148 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC107222.1-201ENST00000510899 637 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 CYP4A27P-201ENST00000567218 190 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC233702.9-201ENST00000581528 203 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AL356575.1-201ENST00000603008 283 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AL137849.1-201ENST00000604767 169 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC037487.3-201ENST00000606668 112 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC011373.1-201ENST00000607270 237 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 MIR8069-1-201ENST00000616627 86 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 MIR8069-2-201ENST00000621412 86 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 SNORD98-201ENST00000636377 67 ntBASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM88BA6NKF7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC007256.1-201ENST00000392253 2765 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AL365361.1-201ENST00000566942 3481 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 RNU6-1010P-201ENST00000362757 107 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 Y_RNA.60-201ENST00000362831 98 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 Y_RNA.416-201ENST00000384014 113 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 Y_RNA.477-201ENST00000384352 108 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 Y_RNA.581-201ENST00000391017 97 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 RPL36AP10-201ENST00000421785 322 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 ARL5AP4-201ENST00000430731 512 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC090525.1-201ENST00000479116 478 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC098869.1-201ENST00000481627 292 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 RNU6-513P-201ENST00000516104 104 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 RNU2-27P-201ENST00000516185 142 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC136932.1-201ENST00000574771 208 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 MIR3923-201ENST00000579521 83 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 MIR4325-201ENST00000583049 90 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AL162713.1-201ENST00000604480 262 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 AC073657.2-201ENST00000605661 303 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMEM88BA6NKF7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TMEM88BA6NKF7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TMEM88BA6NKF7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms