Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC002400.1-201ENST00000569310 726 ntBASIC1.59□□□□□ -2.16
SCN4AP35499 MIR3682-201ENST00000581338 84 ntBASIC1.59□□□□□ -2.16
SCN4AP35499 AC119751.7-201ENST00000600494 245 ntBASIC1.59□□□□□ -2.16
SCN4AP35499 AC016727.2-201ENST00000603988 621 ntBASIC1.59□□□□□ -2.16
SCN4AP35499 FARSBP1-201ENST00000435808 1778 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 RNU4-41P-201ENST00000364426 143 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 RNU6-1072P-201ENST00000384703 107 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 RNU6-443P-201ENST00000384780 107 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 U6atac.2-201ENST00000408644 118 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 RNU6-1025P-201ENST00000410629 104 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 SNORD56-201ENST00000413522 71 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN4AP35499 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN4AP35499 RPS24P1-201ENST00000438550 371 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 MTND1P12-201ENST00000455231 147 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 RNA5SP233-201ENST00000459153 113 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN4AP35499 RPL7P43-201ENST00000478876 753 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AC139453.3-201ENST00000493276 369 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN4AP35499 Vault.3-201ENST00000516676 95 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AP006587.4-201ENST00000526053 529 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AC084364.2-201ENST00000546924 395 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN4AP35499 MIR5692A1-201ENST00000580523 69 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AP002360.4-201ENST00000606980 481 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AC138749.5-201ENST00000611461 208 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 AC116165.2-201ENST00000616705 206 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN4AP35499 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.58□□□□□ -2.16
SCN4AP35499 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCN4AP35499 TEX21P-201ENST00000447107 1476 ntBASIC1.58□□□□□ -2.16
SCN4AP35499 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SCN4AP35499 RNU6-858P-201ENST00000362436 107 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 Y_RNA.159-201ENST00000363674 87 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 MIR520E-201ENST00000384867 87 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.57□□□□□ -2.16
SCN4AP35499 AC104651.1-201ENST00000427559 735 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.57□□□□□ -2.16
SCN4AP35499 FABP5P14-201ENST00000437273 393 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 CECR9-201ENST00000453421 199 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 SNRPFP3-201ENST00000457792 225 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 RPL31P41-201ENST00000477967 372 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC023194.1-201ENST00000493084 308 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 EIF4EP3-201ENST00000498782 656 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 Y_RNA.672-201ENST00000516289 104 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 RNU2-44P-201ENST00000516795 194 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC106038.2-201ENST00000520706 568 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.57□□□□□ -2.16
SCN4AP35499 HSBP1P1-201ENST00000555205 166 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 MIR4765-201ENST00000585007 77 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 Z94722.1-201ENST00000604328 474 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC090578.1-201ENST00000604955 591 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC007792.1-201ENST00000623023 402 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC078883.4-201ENST00000623218 367 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SCN4AP35499 ELL2P3-201ENST00000457883 1602 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 AC068700.1-201ENST00000565862 3754 ntBASIC1.57□□□□□ -2.16
SCN4AP35499 RNU6-529P-201ENST00000363383 104 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 RNU6-809P-201ENST00000384461 107 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 RNU6-220P-201ENST00000390919 107 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AL033519.2-201ENST00000403958 392 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN4AP35499 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN4AP35499 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.56□□□□□ -2.16
SCN4AP35499 AC098826.2-201ENST00000452011 651 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN4AP35499 RPS29P29-201ENST00000456396 171 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN4AP35499 RNU7-26P-201ENST00000458980 63 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 RNU6-953P-201ENST00000459154 107 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.56□□□□□ -2.16
SCN4AP35499 RNU6-1183P-201ENST00000517054 60 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 Y_RNA.717-201ENST00000517106 92 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 MTCO2P4-201ENST00000517968 247 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 BTF3P12-201ENST00000519620 469 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.56□□□□□ -2.16
SCN4AP35499 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.56□□□□□ -2.16
SCN4AP35499 AC090616.3-201ENST00000582184 217 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AL022161.1-201ENST00000604390 213 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 Z99571.1-201ENST00000636677 394 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 MTND5P30-201ENST00000452896 1731 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC010329.5-201ENST00000623497 2174 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SCN4AP35499 SNORD56.2-201ENST00000363242 71 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 Y_RNA.480-201ENST00000384364 102 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 SNORD116-20-201ENST00000384529 92 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SCN4AP35499 SNORA40.6-201ENST00000391153 128 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 CIR1P3-201ENST00000405137 479 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 Y_RNA.623-201ENST00000411128 95 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AL356379.1-201ENST00000414105 126 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 BTF3L4P3-201ENST00000418879 476 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AL365338.1-201ENST00000422282 858 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 ZNF114P1-201ENST00000453500 292 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AF213884.2-201ENST00000510417 903 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 SNORA31.19-201ENST00000517079 126 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms