Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNA5SP361-201ENST00000362686 118 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 RNU5B-2P-201ENST00000363036 113 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 Y_RNA.277-201ENST00000364754 102 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 RNU6-283P-201ENST00000364788 107 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 Y_RNA.504-201ENST00000384481 104 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 MIR487A-201ENST00000385009 80 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 Z98941.1-201ENST00000407764 100 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHS1O60500 HMGN2P10-201ENST00000448085 265 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 RNA5SP310-201ENST00000459084 116 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 GZMAP1-201ENST00000503054 631 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 HSPE1P4-201ENST00000550617 308 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHS1O60500 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHS1O60500 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHS1O60500 AC130289.1-201ENST00000577321 73 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 ARF4P1-201ENST00000605447 541 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 SNORA62.6-201ENST00000606322 83 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 AF117829.1-206ENST00000621883 3802 ntBASIC3.69□□□□□ -1.82
NPHS1O60500 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPHS1O60500 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHS1O60500 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NPHS1O60500 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHS1O60500 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPHS1O60500 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHS1O60500 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.68□□□□□ -1.82
NPHS1O60500 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPHS1O60500 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NPHS1O60500 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPHS1O60500 Y_RNA.65-201ENST00000362846 100 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 Y_RNA.117-201ENST00000363294 101 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 RNU6-142P-201ENST00000384019 107 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 U8.10-201ENST00000384260 133 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPHS1O60500 RNU1-139P-201ENST00000391307 165 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHS1O60500 NUTF2P3-201ENST00000448540 384 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AC084357.1-201ENST00000473404 255 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 RPS4XP22-201ENST00000480755 780 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 RPS23P5-201ENST00000495419 428 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AC006445.2-201ENST00000510061 472 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 RNU6-1114P-201ENST00000516022 107 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHS1O60500 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHS1O60500 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHS1O60500 AC011602.1-201ENST00000546484 331 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AC027288.2-201ENST00000553028 243 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AL391261.3-201ENST00000557194 520 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AL356157.2-201ENST00000605122 111 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AC007656.2-201ENST00000624902 4547 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
NPHS1O60500 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHS1O60500 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPHS1O60500 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
NPHS1O60500 RNU6-1266P-201ENST00000362794 105 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 SNORA56-201ENST00000383966 129 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 SNORA36A-201ENST00000384221 132 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 Y_RNA.462-201ENST00000384268 102 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 RNU6-541P-201ENST00000384709 110 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPHS1O60500 RNA5SP424-201ENST00000390988 115 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 RPS4XP3-201ENST00000398541 413 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 AP000567.1-201ENST00000406413 156 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 BPY2DP-201ENST00000422208 265 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 AL445305.1-201ENST00000432577 575 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 MTND2P29-201ENST00000438595 412 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 RPL23AP62-201ENST00000463396 453 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 MED28P2-201ENST00000475771 317 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 RNU6-496P-201ENST00000516145 99 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 RNU5B-3P-201ENST00000516601 115 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 NACAP3-201ENST00000552100 481 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 AC021739.1-201ENST00000559631 174 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 U7.8-201ENST00000619968 63 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 ADAM3A-203ENST00000461344 2157 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPHS1O60500 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
NPHS1O60500 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.67□□□□□ -1.82
NPHS1O60500 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHS1O60500 AL079305.1-201ENST00000623159 3008 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHS1O60500 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHS1O60500 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NPHS1O60500 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHS1O60500 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHS1O60500 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHS1O60500 SNORD58.1-201ENST00000391313 66 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 MTHFD2P2-201ENST00000407725 247 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHS1O60500 AL356095.1-201ENST00000417217 199 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AC006989.1-201ENST00000427212 131 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms