Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC3O15379 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 CENPCP1-201ENST00000533085 2578 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HDAC3O15379 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 OR4G1P-203ENST00000641984 1631 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 Y_RNA.86-201ENST00000363020 111 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 SNORA72.1-201ENST00000363485 129 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-1303P-201ENST00000364841 107 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-867P-201ENST00000364956 107 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-715P-201ENST00000365204 103 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-38P-201ENST00000384085 107 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 SNORA67.4-201ENST00000384688 142 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 MIR514A2-201ENST00000385131 88 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 MIR514A3-201ENST00000385132 88 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 SNORA16.2-201ENST00000390991 127 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 SNORA46.1-201ENST00000391069 153 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDAC3O15379 RNU4-46P-201ENST00000410818 138 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-387P-201ENST00000411331 105 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNA5SP111-201ENST00000411386 101 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC022028.1-201ENST00000412054 408 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.14□□□□□ -2.07
HDAC3O15379 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.14□□□□□ -2.07
HDAC3O15379 SKA2P1-201ENST00000425592 390 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 ZNF863P-201ENST00000426746 417 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AL591704.1-201ENST00000432574 275 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 SNRPEP9-201ENST00000436794 238 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDAC3O15379 MTND3P16-201ENST00000452205 344 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-333P-201ENST00000459117 107 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 UBE2DNL-203ENST00000474922 222 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-507P-201ENST00000516045 100 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-1282P-201ENST00000516735 96 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 RNU6-1315P-201ENST00000517187 99 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.14□□□□□ -2.07
HDAC3O15379 AF235103.2-201ENST00000525753 346 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.14□□□□□ -2.07
HDAC3O15379 MIR3162-201ENST00000581818 82 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.14□□□□□ -2.07
HDAC3O15379 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC073539.2-201ENST00000597113 165 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 BNIP3P9-201ENST00000603714 553 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 APOOP1-201ENST00000604695 592 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC007938.3-201ENST00000604965 623 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 FTX_3.1-201ENST00000610451 147 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDAC3O15379 DISC2.1-201ENST00000612827 205 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 DUSP12P1-201ENST00000612874 516 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
HDAC3O15379 AC022306.2-201ENST00000617563 647 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC092794.2-201ENST00000620933 563 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 AC006504.8-201ENST00000621046 635 ntBASIC2.14□□□□□ -2.07
HDAC3O15379 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDAC3O15379 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.13□□□□□ -2.07
HDAC3O15379 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.13□□□□□ -2.07
HDAC3O15379 Y_RNA.160-201ENST00000363677 92 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RNU5E-4P-201ENST00000364931 120 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RNU6-332P-201ENST00000391193 108 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RNU2-29P-201ENST00000410423 189 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 Y_RNA.615-201ENST00000410769 117 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.13□□□□□ -2.07
HDAC3O15379 SRIP2-201ENST00000428470 166 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 OSTCP8-201ENST00000445117 448 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.13□□□□□ -2.07
HDAC3O15379 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RPS29P20-201ENST00000489592 171 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.13□□□□□ -2.07
HDAC3O15379 AC112206.3-201ENST00000514578 389 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RNU4-29P-201ENST00000515943 174 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 RNA5SP291-201ENST00000517222 105 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.13□□□□□ -2.07
HDAC3O15379 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
HDAC3O15379 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.13□□□□□ -2.07
HDAC3O15379 AL157871.3-201ENST00000557231 293 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
HDAC3O15379 AC009033.1-201ENST00000624279 431 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC090617.10-201ENST00000624308 134 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AP003400.5-201ENST00000624827 617 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 U2.21-201ENST00000637295 81 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 AC100810.6-201ENST00000638068 285 ntBASIC2.13□□□□□ -2.07
HDAC3O15379 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
HDAC3O15379 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HDAC3O15379 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.12□□□□□ -2.07
HDAC3O15379 Y_RNA.70-201ENST00000362886 110 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 Y_RNA.167-201ENST00000363735 109 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 RNU6-522P-201ENST00000364497 107 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HDAC3O15379 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HDAC3O15379 SNORD37.1-201ENST00000390968 65 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AL606923.1-201ENST00000406616 190 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.12□□□□□ -2.07
HDAC3O15379 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.12□□□□□ -2.07
HDAC3O15379 EIF4EP4-201ENST00000424916 578 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms