Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR4300-201ENST00000581016 96 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 MIR3128-201ENST00000581957 66 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AC091152.3-201ENST00000604227 325 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AL442067.1-201ENST00000613261 223 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AC141273.2-201ENST00000618989 130 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 ZNF962P-201ENST00000443465 3140 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AL391987.6-201ENST00000305671 199 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RNA5SP432-201ENST00000362480 116 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 Y_RNA.84-201ENST00000363011 104 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RNU6-1285P-201ENST00000363480 105 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 SNORD115-8-201ENST00000363856 82 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 SNORD115-38-201ENST00000365037 82 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RNU6-301P-201ENST00000384277 107 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RNU6-1203P-201ENST00000410703 110 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 CYCSP48-201ENST00000417124 323 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RPL21P38-201ENST00000418090 167 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AL590135.1-201ENST00000422215 156 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AC019205.3-201ENST00000424573 156 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 SNORA31.1-201ENST00000515993 133 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 SNORA31.5-201ENST00000516190 133 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RNU6-58P-201ENST00000517143 103 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AC069240.1-201ENST00000548774 375 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AC025281.1-201ENST00000567026 265 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AC073410.2-201ENST00000603240 332 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 AC058791.1-201ENST00000608412 3198 ntBASIC4.55□□□□□ -1.68
TMEM88BA6NKF7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC010889.1-201ENST00000566193 2666 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 U8.10-201ENST00000384260 133 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 RNU6-159P-201ENST00000391080 106 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AL079342.1-201ENST00000401460 267 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 RNU6-121P-201ENST00000410525 99 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 RNU2-49P-201ENST00000410666 184 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC023141.4-201ENST00000412031 328 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 HMGN2P7-201ENST00000456186 273 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 CEACAMP4-201ENST00000457676 421 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 RPS23P5-201ENST00000495419 428 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 SNORA31.21-201ENST00000517180 77 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 MIR4472-2-201ENST00000582069 67 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 AC104984.5-201ENST00000586878 94 ntBASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.54□□□□□ -1.68
TMEM88BA6NKF7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 AC006504.1-201ENST00000562493 3666 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 SNORD114-19-201ENST00000363072 75 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 Y_RNA.105-201ENST00000363182 111 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 RNU6-750P-201ENST00000390946 107 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 SNORD12B-201ENST00000410433 91 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 WARS2P1-201ENST00000429678 537 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 AC004383.1-201ENST00000438135 289 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 RNA5SP164-201ENST00000516533 110 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 LARP7P3-201ENST00000579888 337 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 RNU1-30P-201ENST00000606575 163 ntBASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM88BA6NKF7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TMEM88BA6NKF7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms